RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ACAP1Q15027 740 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 IQCB1Q15051 598 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 ELOCQ15369 112 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 TBC1D25Q3MII6 688 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 TDRD12Q587J7 1177 aaKnown RBP12.54□□□□□ -0.4
SREBF1-215ENST00000487401 E4F1Q66K89 784 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-215ENST00000487401 GUSBP11Q6P575 273 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 RD3Q7Z3Z2 195 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 ARHGAP12Q8IWW6 846 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 LSMEM2Q8N112 164 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 FSTL5Q8N475 847 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-215ENST00000487401 SNIP1Q8TAD8 396 aaKnown RBP12.54□□□□□ -0.4
SREBF1-215ENST00000487401 HSPH1Q92598 858 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 TSACCQ96A04 125 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-215ENST00000487401 APOOQ9BUR5 198 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 LRRC61Q9BV99 259 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 ISCUQ9H1K1 167 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 GULP1Q9UBP9 304 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 BZW2Q9Y6E2 419 aaKnown RBP12.54□□□□□ -0.4
SREBF1-215ENST00000487401 FAM208BQ5VWN6 2430 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 PLXNA2O75051 1894 aa12.54□□□□□ -0.4
SREBF1-215ENST00000487401 ITPR1Q14643 2758 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 COL5A1P20908 1838 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-215ENST00000487401 EME2A4GXA9 379 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-215ENST00000487401 CFAP69A5D8W1 941 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 RASGRP1O95267 797 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 TNFP01375 233 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 MPOP05164 745 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 ALPIP09923 528 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 ITPKBP27987 946 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 MMP12P39900 470 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 RGRP47804 291 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 HK3P52790 923 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 AP1S1P61966 158 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 GABREP78334 506 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 FANCCQ00597 558 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 CCDC173Q0VFZ6 552 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 DPYSQ14117 519 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 LBRQ14739 615 aaKnown RBP12.53□□□□□ -0.4
SREBF1-215ENST00000487401 NFATC4Q14934 902 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 FIGNQ5HY92 759 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 C6orf132Q5T0Z8 1188 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 TMCO4Q5TGY1 634 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 ARHGAP36Q6ZRI8 547 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 NPWQ8N729 165 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 NSMCE1Q8WV22 266 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 NAT6Q93015 286 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 GRAMD1AQ96CP6 724 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 ZNF578Q96N58 590 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-215ENST00000487401 ZNF599Q96NL3 588 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 BOCQ9BWV1 1114 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 CLPBQ9H078 707 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 KLQ9UEF7 1012 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 PADI4Q9UM07 663 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 OR1A2Q9Y585 309 aa12.53□□□□□ -0.4
SREBF1-215ENST00000487401 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-215ENST00000487401 CACNB4O00305 520 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-215ENST00000487401 SERPING1P05155 500 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 ELFN1P0C7U0 828 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 TGM2P21980 687 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 AMPD1P23109 780 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 IL1R2P27930 398 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 RBMS1P29558 406 aaKnown RBP12.52□□□□□ -0.41
SREBF1-215ENST00000487401 LSSP48449 732 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 UBASH3AP57075 661 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 SRP54P61011 504 aaKnown RBP12.52□□□□□ -0.41
SREBF1-215ENST00000487401 MTM1Q13496 603 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 COL9A2Q14055 689 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-215ENST00000487401 PIGHQ14442 188 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-215ENST00000487401 ZNF235Q14590 738 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 AGERQ15109 404 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 TCEA2Q15560 299 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 NFKBIBQ15653 356 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 ISXQ2M1V0 245 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 ALG11Q2TAA5 492 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 SMTNL2Q2TAL5 461 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 SOWAHCQ53LP3 525 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-215ENST00000487401 LVRNQ6Q4G3 990 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 CRTC1Q6UUV9 634 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 TMCO3Q6UWJ1 677 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 RBM44Q6ZP01 1051 aaKnown RBP12.52□□□□□ -0.41
SREBF1-215ENST00000487401 CYP4V2Q6ZWL3 525 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-215ENST00000487401 ZSWIM9Q86XI8 627 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 GKN2Q86XP6 184 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 SLC35F3Q8IY50 421 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 BBS5Q8N3I7 341 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 SDR16C5Q8N3Y7 309 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 WDR48Q8TAF3 677 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 CPLX3Q8WVH0 158 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 SYN2Q92777 582 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-215ENST00000487401 ECHDC3Q96DC8 303 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 CRELD1Q96HD1 420 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 WDR92Q96MX6 357 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 PSKH2Q96QS6 385 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 SYNDIG1Q9H7V2 258 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 POLR1BQ9H9Y6 1135 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 CBX8Q9HC52 389 aa12.52□□□□□ -0.41
SREBF1-215ENST00000487401 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.52□□□□□ -0.41
SREBF1-215ENST00000487401 IP6K2Q9UHH9 426 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms