RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 SCML2Q9UQR0 700 aa8.6□□□□□ -1.03
APTX-228ENST00000486724 BZW2Q9Y6E2 419 aaKnown RBP8.6□□□□□ -1.03
APTX-228ENST00000486724 EDDM13A0A1B0GTR0 161 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 A0A1W2PQH9 124 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 A8MXQ7 604 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 MKRN2OSH3BPM6 223 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 AP1G2O75843 785 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 RASSF9O75901 435 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 GFPT2O94808 682 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 IL1BP01584 269 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 CSF2P04141 144 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 ASLP04424 464 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 HMBSP08397 361 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 PRKAR1AP10644 381 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 P4HA1P13674 534 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 PRLRP16471 622 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 MZF1P28698 734 aaPredicted RBP8.59□□□□□ -1.03
APTX-228ENST00000486724 AKT2P31751 481 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 CYLC1P35663 651 aaPredicted RBP8.59□□□□□ -1.03
APTX-228ENST00000486724 YWHAEP62258 255 aaKnown RBP8.59□□□□□ -1.03
APTX-228ENST00000486724 ACTN3Q08043 901 aaPredicted RBP8.59□□□□□ -1.03
APTX-228ENST00000486724 KLHL30Q0D2K2 578 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 MRPL49Q13405 166 aaKnown RBP8.59□□□□□ -1.03
APTX-228ENST00000486724 ASTE1Q2TB18 679 aaPredicted RBP8.59□□□□□ -1.03
APTX-228ENST00000486724 TDRD12Q587J7 1177 aaKnown RBP8.59□□□□□ -1.03
APTX-228ENST00000486724 ZNF667Q5HYK9 610 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 RAD9BQ6WBX8 426 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 PARGQ86W56 976 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 DCP2Q8IU60 420 aaKnown RBP8.59□□□□□ -1.03
APTX-228ENST00000486724 CCDC13Q8IYE1 715 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 KDM1BQ8NB78 822 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 C1orf131Q8NDD1 294 aaKnown RBP8.59□□□□□ -1.03
APTX-228ENST00000486724 COG1Q8WTW3 980 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 ELMO3Q96BJ8 720 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 SLC45A3Q96JT2 553 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 ANKRD27Q96NW4 1050 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 OSBPL9Q96SU4 736 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 CDK5RAP1Q96SZ6 601 aaKnown RBP8.59□□□□□ -1.03
APTX-228ENST00000486724 NAPGQ99747 312 aaPredicted RBP8.59□□□□□ -1.03
APTX-228ENST00000486724 SH3GL2Q99962 352 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 REPIN1Q9BWE0 567 aaKnown RBP8.59□□□□□ -1.03
APTX-228ENST00000486724 SLC29A3Q9BZD2 475 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 CDH19Q9H159 772 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 NHEJ1Q9H9Q4 299 aaPredicted RBP8.59□□□□□ -1.03
APTX-228ENST00000486724 RASAL2Q9UJF2 1139 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 HPCAL4Q9UM19 191 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 SLC5A6Q9Y289 635 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 MAP4K5Q9Y4K4 846 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 SHANK1Q9Y566 2161 aa8.59□□□□□ -1.03
APTX-228ENST00000486724 DOCK9Q9BZ29 2069 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 HEATR9A2RTY3 570 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 TCP11X1B4DZS4 312 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 K7EM74 188 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 FOXN3O00409 490 aaPredicted RBP8.58□□□□□ -1.04
APTX-228ENST00000486724 SLC31A1O15431 190 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 NKX2-8O15522 239 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 NDUFA10O95299 355 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 LCA5LO95447 670 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 RPLP0P05388 317 aaKnown RBP8.58□□□□□ -1.04
APTX-228ENST00000486724 PLEKP08567 350 aaPredicted RBP8.58□□□□□ -1.04
APTX-228ENST00000486724 FAM163BP0C2L3 166 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 PECAM1P16284 738 aaPredicted RBP8.58□□□□□ -1.04
APTX-228ENST00000486724 HNRNPA2B1P22626 353 aaKnown RBP8.58□□□□□ -1.04
APTX-228ENST00000486724 EIF4A3P38919 411 aaKnown RBP8.58□□□□□ -1.04
APTX-228ENST00000486724 KIF11P52732 1056 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 TNNC1P63316 161 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 PTK2Q05397 1052 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 INCA1Q0VD86 236 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 ELAVL3Q14576 367 aaKnown RBP8.58□□□□□ -1.04
APTX-228ENST00000486724 DEFB109BQ30KR1 87 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 WDR72Q3MJ13 1102 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 ESRP1Q6NXG1 681 aaKnown RBP8.58□□□□□ -1.04
APTX-228ENST00000486724 TLDC1Q6P9B6 456 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 SCARA5Q6ZMJ2 495 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 PAQR9Q6ZVX9 377 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 PTAR1Q7Z6K3 402 aaPredicted RBP8.58□□□□□ -1.04
APTX-228ENST00000486724 ABI3BPQ7Z7G0 1075 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 TTC39CQ8N584 583 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 ZMIZ2Q8NF64 920 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 FAM174AQ8TBP5 190 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 LMX1AQ8TE12 382 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 EPS8L1Q8TE68 723 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 ZNF483Q8TF39 744 aaPredicted RBP8.58□□□□□ -1.04
APTX-228ENST00000486724 CALR3Q96L12 384 aaKnown RBP8.58□□□□□ -1.04
APTX-228ENST00000486724 LURAP1Q96LR2 239 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 CCDC42Q96M95 316 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 NOX5Q96PH1 765 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 FAM129BQ96TA1 746 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 SYT11Q9BT88 431 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 CPEB1Q9BZB8 566 aaKnown RBP8.58□□□□□ -1.04
APTX-228ENST00000486724 HAUS4Q9H6D7 363 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 SMYD3Q9H7B4 428 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 CYP3A43Q9HB55 503 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 CISHQ9NSE2 258 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 GGT7Q9UJ14 662 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 NAGPAQ9UK23 515 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 PADI4Q9UM07 663 aa8.58□□□□□ -1.04
APTX-228ENST00000486724 A0A1W2PQM1 296 aa8.57□□□□□ -1.04
APTX-228ENST00000486724 AGRPO00253 132 aa8.57□□□□□ -1.04
APTX-228ENST00000486724 DUX1O43812 170 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms