RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 MMP20O60882 483 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 TM7SF2O76062 418 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 HLA-DQB2P05538 268 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 CD59P13987 128 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 CSRP1P21291 193 aaKnown RBP18.33■□□□□ 0.52
COL1A1-207ENST00000486572 CES1P23141 567 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 CCT8P50990 548 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 COPS2P61201 443 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 IFI35P80217 286 aaPredicted RBP18.33■□□□□ 0.52
COL1A1-207ENST00000486572 AP1B1Q10567 949 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 TRAF2Q12933 501 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 GCNT7Q6ZNI0 430 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 PEX26Q7Z412 305 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 NT5DC3Q86UY8 548 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 DENND6BQ8NEG7 585 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 FAM174AQ8TBP5 190 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 PDCD6IPQ8WUM4 868 aaKnown RBP18.33■□□□□ 0.52
COL1A1-207ENST00000486572 KLHDC7BQ96G42 594 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 LENG8Q96PV6 779 aaPredicted RBP18.33■□□□□ 0.52
COL1A1-207ENST00000486572 TRPM6Q9BX84 2022 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 DOCK9Q9BZ29 2069 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 DNAH14Q0VDD8 3507 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 A6NNZ2 444 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 KCNK3O14649 394 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 RAD51BO15315 384 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 CPP00450 1065 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 PRKCGP05129 697 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 THEGLP0DJG4 465 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 PECAM1P16284 738 aaPredicted RBP18.32■□□□□ 0.52
COL1A1-207ENST00000486572 RWDD2BP57060 319 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 CLDN2P57739 230 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 FAM193AP78312 1265 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 DSC2Q02487 901 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 ADCY2Q08462 1091 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 ZBTB17Q13105 803 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 PPM1JQ5JR12 505 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 KYAT3Q6YP21 454 aaKnown RBP18.32■□□□□ 0.52
COL1A1-207ENST00000486572 ABI3BPQ7Z7G0 1075 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 PIP4P1Q86T03 277 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 RNF10Q8N5U6 811 aaKnown RBP18.32■□□□□ 0.52
COL1A1-207ENST00000486572 P3H4Q92791 437 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 ELF4Q99607 663 aaPredicted RBP18.32■□□□□ 0.52
COL1A1-207ENST00000486572 KLF6Q99612 283 aaPredicted RBP18.32■□□□□ 0.52
COL1A1-207ENST00000486572 IL12RB2Q99665 862 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 C1QTNF7Q9BXJ2 289 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 SAE1Q9UBE0 346 aaPredicted RBP18.32■□□□□ 0.52
COL1A1-207ENST00000486572 AMFRQ9UKV5 643 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 PCDHB9Q9Y5E1 797 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 PCDHGB2Q9Y5G2 931 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 HS3ST3A1Q9Y663 406 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 CAPN6Q9Y6Q1 641 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 TMEM131Q92545 1883 aa18.32■□□□□ 0.52
COL1A1-207ENST00000486572 ASCC3Q8N3C0 2202 aaKnown RBP18.31■□□□□ 0.52
COL1A1-207ENST00000486572 A0A1B0GTQ1 180 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 MIF4GDA9UHW6 222 aaKnown RBP18.31■□□□□ 0.52
COL1A1-207ENST00000486572 FPGTO14772 594 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 KRT86O43790 486 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 NRDCO43847 1150 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 KCNK5O95279 499 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 PGLSO95336 258 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 JCHAINP01591 159 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 C6P13671 934 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 KCNA4P22459 653 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 NFKBIAP25963 317 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 ARRB1P49407 418 aaPredicted RBP18.31■□□□□ 0.52
COL1A1-207ENST00000486572 LIG3P49916 1009 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 PEX5P50542 639 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 NOVA1P51513 510 aaKnown RBP18.31■□□□□ 0.52
COL1A1-207ENST00000486572 PRKD1Q15139 912 aaPredicted RBP18.31■□□□□ 0.52
COL1A1-207ENST00000486572 ARMC12Q5T9G4 340 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 BBS12Q6ZW61 710 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 DPPA4Q7L190 304 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 SPATS2Q86XZ4 545 aaKnown RBP18.31■□□□□ 0.52
COL1A1-207ENST00000486572 OXR1Q8N573 874 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.31■□□□□ 0.52
COL1A1-207ENST00000486572 OR13H1Q8NG92 308 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 ARRDC2Q8TBH0 407 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 ALG3Q92685 438 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 HEMGNQ9BXL5 484 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 SLC32A1Q9H598 525 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 ERVMER34-1Q9H9K5 563 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 EFR3BQ9Y2G0 817 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 RAI2Q9Y5P3 530 aa18.31■□□□□ 0.52
COL1A1-207ENST00000486572 CFAP69A5D8W1 941 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 POM121BA6NF01 834 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 YKT6O15498 198 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 FTCDO95954 541 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 CCDC175P0C221 793 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 CA4P22748 312 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 PTPN7P35236 360 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 CETN2P41208 172 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 CCZ1BP86790 482 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 CCZ1P86791 482 aaPredicted RBP18.3■□□□□ 0.52
COL1A1-207ENST00000486572 SEMG2Q02383 582 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 RALGDSQ12967 914 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 PSAPL1Q6NUJ1 521 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 PTAR1Q7Z6K3 402 aaPredicted RBP18.3■□□□□ 0.52
COL1A1-207ENST00000486572 NAXDQ8IW45 347 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 UBL4BQ8N7F7 174 aa18.3■□□□□ 0.52
COL1A1-207ENST00000486572 CNTD1Q8N815 330 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms