RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 NPNTQ6UXI9 565 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 KYAT3Q6YP21 454 aaKnown RBP12.6□□□□□ -0.39
PTCD1-205ENST00000485746 GCNT7Q6ZNI0 430 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 VSIG1Q86XK7 387 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 PGBD5Q8N414 524 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 TEX26Q8N6G2 289 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 DENND6BQ8NEG7 585 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 TPCN2Q8NHX9 752 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 BMFQ96LC9 184 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 TSGA13Q96PP4 275 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 SEMA3CQ99985 751 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 DNAJC28Q9NX36 388 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 FTSJ1Q9UET6 329 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 PCOLCE2Q9UKZ9 415 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 PHTF1Q9UMS5 762 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 APOBEC2Q9Y235 224 aaKnown RBP12.6□□□□□ -0.39
PTCD1-205ENST00000485746 WDR87Q6ZQQ6 2873 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 RCCD1A6NED2 376 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 POM121BA6NF01 834 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 C3orf70A6NLC5 250 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-205ENST00000485746 SPINT1O43278 529 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 SDC3O75056 442 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 LDOC1O95751 146 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-205ENST00000485746 JCHAINP01591 159 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 CYP2A6P11509 494 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-205ENST00000485746 C6P13671 934 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 CA4P22748 312 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 FECHP22830 423 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 EPHA8P29322 1005 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-205ENST00000485746 RXRGP48443 463 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 THOP1P52888 689 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 KIF5AQ12840 1032 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 PDE1CQ14123 709 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-205ENST00000485746 ARHGEF7Q14155 803 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 ACOX1Q15067 660 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 DENND2CQ68D51 928 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 SLC9A4Q6AI14 798 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 SPOCD1Q6ZMY3 1216 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 ABI3BPQ7Z7G0 1075 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 ZSWIM9Q86XI8 627 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 EID2Q8N6I1 236 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 PLD5Q8N7P1 536 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 KIAA1524Q8TCG1 905 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 VOPP1Q96AW1 172 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 HDAC11Q96DB2 347 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 RBM41Q96IZ5 413 aaKnown RBP12.59□□□□□ -0.39
PTCD1-205ENST00000485746 LGMNQ99538 433 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 BTBD3Q9Y2F9 522 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 RAI2Q9Y5P3 530 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 DUSP10Q9Y6W6 482 aa12.59□□□□□ -0.39
PTCD1-205ENST00000485746 PCDH15Q96QU1 1955 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 DMXL1Q9Y485 3027 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 MACROD2A1Z1Q3 448 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 H3BM21 787 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 KCNK1O00180 336 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 TRAFD1O14545 582 aaPredicted RBP12.58□□□□□ -0.4
PTCD1-205ENST00000485746 CST8O60676 142 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 PCCBP05166 539 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 PTMAP06454 111 aaKnown RBP12.58□□□□□ -0.4
PTCD1-205ENST00000485746 CR2P20023 1033 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 MMP12P39900 470 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 CDKN2BP42772 138 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 NR2C2P49116 596 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 DSC2Q02487 901 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 PPIDQ08752 370 aaKnown RBP12.58□□□□□ -0.4
PTCD1-205ENST00000485746 ZNF542PQ5EBM4 170 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 DBX2Q6ZNG2 339 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 USP45Q70EL2 814 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 DPPA4Q7L190 304 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 KATNAL2Q8IYT4 538 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 SAP25Q8TEE9 199 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 MAML1Q92585 1016 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 P3H4Q92791 437 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 FATE1Q969F0 183 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 CENPTQ96BT3 561 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 ECHDC3Q96DC8 303 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 KLF6Q99612 283 aaPredicted RBP12.58□□□□□ -0.4
PTCD1-205ENST00000485746 DESI2Q9BSY9 194 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 BRD8Q9H0E9 1235 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 MBNL1Q9NR56 388 aaKnown RBP12.58□□□□□ -0.4
PTCD1-205ENST00000485746 B4GALT6Q9UBX8 382 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 AMACRQ9UHK6 382 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 ANGPTL2Q9UKU9 493 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 AMFRQ9UKV5 643 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 ADAMTS9Q9P2N4 1935 aa12.58□□□□□ -0.4
PTCD1-205ENST00000485746 NYNRINQ9P2P1 1898 aaKnown RBP12.57□□□□□ -0.4
PTCD1-205ENST00000485746 CFAP69A5D8W1 941 aa12.57□□□□□ -0.4
PTCD1-205ENST00000485746 GOLGA6CA6NDK9 693 aa12.57□□□□□ -0.4
PTCD1-205ENST00000485746 GOLGA6BA6NDN3 693 aa12.57□□□□□ -0.4
PTCD1-205ENST00000485746 BTNL10A8MVZ5 291 aa12.57□□□□□ -0.4
PTCD1-205ENST00000485746 HTRA2O43464 458 aaPredicted RBP12.57□□□□□ -0.4
PTCD1-205ENST00000485746 TNFSF14O43557 240 aa12.57□□□□□ -0.4
PTCD1-205ENST00000485746 NRDCO43847 1150 aa12.57□□□□□ -0.4
PTCD1-205ENST00000485746 RECQL5O94762 991 aaPredicted RBP12.57□□□□□ -0.4
PTCD1-205ENST00000485746 PGLSO95336 258 aa12.57□□□□□ -0.4
PTCD1-205ENST00000485746 TRIM16O95361 564 aa12.57□□□□□ -0.4
PTCD1-205ENST00000485746 HLA-DQB2P05538 268 aa12.57□□□□□ -0.4
PTCD1-205ENST00000485746 FTH1P19P0C7X4 201 aa12.57□□□□□ -0.4
PTCD1-205ENST00000485746 GOLGA6DP0CG33 693 aa12.57□□□□□ -0.4
PTCD1-205ENST00000485746 ALPPL2P10696 532 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms