RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 MRGPRX2Q96LB1 330 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 ADGRE3Q9BY15 652 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 DDX47Q9H0S4 455 aaKnown RBP20.04■□□□□ 0.8
COL6A2-208ENST00000485591 C6orf106Q9H6K1 298 aaPredicted RBP20.04■□□□□ 0.8
COL6A2-208ENST00000485591 PAK5Q9P286 719 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 CDC23Q9UJX2 597 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 TPX2Q9ULW0 747 aaKnown RBP20.04■□□□□ 0.8
COL6A2-208ENST00000485591 ITM2BQ9Y287 266 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 PLXNA2O75051 1894 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 TBC1D3DA0A087WVF3 549 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 TBC1D3IA0A087WXS9 549 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 TBC1D3EA0A087X179 549 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 TBC1D3KA0A087X1G2 549 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 GOLGA6CA6NDK9 693 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 GOLGA6BA6NDN3 693 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 TBC1D3FA6NER0 549 aaPredicted RBP20.03■□□□□ 0.8
COL6A2-208ENST00000485591 FAM47DPA6NHR8 397 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 TBC1D3LB9A6J9 549 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 URI1O94763 535 aaPredicted RBP20.03■□□□□ 0.8
COL6A2-208ENST00000485591 RHOBTB1O94844 696 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 EPOP01588 193 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 TBC1D3HP0C7X1 549 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 GOLGA6DP0CG33 693 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 ETS1P14921 441 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 NBL1P41271 181 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 WNT3AP56704 352 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 KIAA0895LQ68EN5 471 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 TBC1D3GQ6DHY5 549 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 TBC1D3CQ6IPX1 549 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 C4orf22Q6V702 233 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 PRR23BQ6ZRT6 265 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 PRUNE1Q86TP1 453 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 TRIM69Q86WT6 500 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 TMEFF1Q8IYR6 380 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 TBC1D3Q8IZP1 549 aaPredicted RBP20.03■□□□□ 0.8
COL6A2-208ENST00000485591 NDUFAF2Q8N183 169 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 LPCAT1Q8NF37 534 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 IPMKQ8NFU5 416 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 KIF18AQ8NI77 898 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 GRK7Q8WTQ7 553 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 FOXJ1Q92949 421 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 IFT43Q96FT9 208 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 MCCC1Q96RQ3 725 aaPredicted RBP20.03■□□□□ 0.8
COL6A2-208ENST00000485591 GOLGA6AQ9NYA3 693 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 FEZ2Q9UHY8 353 aaPredicted RBP20.03■□□□□ 0.8
COL6A2-208ENST00000485591 GGT7Q9UJ14 662 aa20.03■□□□□ 0.8
COL6A2-208ENST00000485591 CACNA1HO95180 2353 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 TRPM6Q9BX84 2022 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 A0A0J9YYE9 177 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 LOC285095A0A1B0GVY8 99 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 METTL12A8MUP2 240 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 NEMP1O14524 444 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 PCDH8O95206 1070 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 NDST3O95803 873 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 TRBC1P01850 177 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 PRKCGP05129 697 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 ZSCAN5DPP0CG00 497 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 ITIH2P19823 946 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 RPL22P35268 128 aaKnown RBP20.02■□□□□ 0.8
COL6A2-208ENST00000485591 FDFT1P37268 417 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 CCR5P51681 352 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 EPHB1P54762 984 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 PPP2CBP62714 309 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 PPP2CAP67775 309 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 TMEM52BQ4KMG9 183 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 KIAA1161Q6NSJ0 714 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 USP45Q70EL2 814 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 DPPA4Q7L190 304 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 ZNF572Q7Z3I7 529 aaPredicted RBP20.02■□□□□ 0.8
COL6A2-208ENST00000485591 SLC41A1Q8IVJ1 513 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 SLCO2A1Q92959 643 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 SCRN2Q96FV2 425 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 HSPA12BQ96MM6 686 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 RUNDC3BQ96NL0 473 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 FSD1LQ9BXM9 530 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 SEMA4AQ9H3S1 761 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 FAM86C1Q9NVL1 165 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 PCYOX1Q9UHG3 505 aa20.02■□□□□ 0.8
COL6A2-208ENST00000485591 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.02■□□□□ 0.8
COL6A2-208ENST00000485591 MUC6Q6W4X9 2439 aa20.02■□□□□ 0.79
COL6A2-208ENST00000485591 DOCK9Q9BZ29 2069 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 PRR23AA6NEV1 266 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 CAPN8A6NHC0 703 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 ANKRD66B4E2M5 251 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 LATO43561 262 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 RNGTTO60942 597 aaKnown RBP20.01■□□□□ 0.79
COL6A2-208ENST00000485591 ECEL1O95672 775 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 GAS8O95995 478 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 IGHV4-34P06331 123 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 CYP2A6P11509 494 aaPredicted RBP20.01■□□□□ 0.79
COL6A2-208ENST00000485591 TNNT3P45378 269 aaPredicted RBP20.01■□□□□ 0.79
COL6A2-208ENST00000485591 FAM193AP78312 1265 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 CKAP4Q07065 602 aaKnown RBP20.01■□□□□ 0.79
COL6A2-208ENST00000485591 RALGDSQ12967 914 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 SEMA5AQ13591 1074 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 TUBB2AQ13885 445 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 GALNT3Q14435 633 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 QPCTQ16769 361 aa20.01■□□□□ 0.79
COL6A2-208ENST00000485591 TMEM259Q4ZIN3 620 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms