RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	F2RL1	P55085	397 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	ID2	Q02363	134 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	CALD1	Q05682	793 aa	Known RBP	4.23	□□□□□ -1.73
FN1-222	ENST00000485567	LPIN1	Q14693	890 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	ADIPOQ	Q15848	244 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	HSPB2	Q16082	182 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	CCDC96	Q2M329	555 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	C6orf10	Q5SRN2	563 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	C6orf141	Q5SZD1	244 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.23	□□□□□ -1.73
FN1-222	ENST00000485567	PLEKHA7	Q6IQ23	1121 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	NAA16	Q6N069	864 aa	Predicted RBP	4.23	□□□□□ -1.73
FN1-222	ENST00000485567	GGN	Q86UU5	652 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	TDRP	Q86YL5	185 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	CAMK1D	Q8IU85	385 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	LURAP1L	Q8IV03	231 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	HACE1	Q8IYU2	909 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	GJC3	Q8NFK1	279 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	BICD2	Q8TD16	824 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	DPF1	Q92782	380 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	SECISBP2L	Q93073	1101 aa	Known RBP	4.23	□□□□□ -1.73
FN1-222	ENST00000485567	EME1	Q96AY2	570 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	OTULIN	Q96BN8	352 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	FBXL8	Q96CD0	374 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	CHFR	Q96EP1	664 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	TASP1	Q9H6P5	420 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	RIOX1	Q9H6W3	641 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	MAGEE1	Q9HCI5	957 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	BPIFA1	Q9NP55	256 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	CNOT8	Q9UFF9	292 aa	Known RBP	4.23	□□□□□ -1.73
FN1-222	ENST00000485567	ING1	Q9UK53	422 aa	Predicted RBP	4.23	□□□□□ -1.73
FN1-222	ENST00000485567	A3GALT2	U3KPV4	340 aa		4.23	□□□□□ -1.73
FN1-222	ENST00000485567	RPGRIP1L	Q68CZ1	1315 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567		A0A0G2JK05	382 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	SMIM35	A0A1B0GVV1	85 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	SNAP23	O00161	211 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	SH2B2	O14492	632 aa	Predicted RBP	4.22	□□□□□ -1.73
FN1-222	ENST00000485567	IFNA2	P01563	188 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	KLKB1	P03952	638 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	DNTT	P04053	509 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	RB1	P06400	928 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	PTMA	P06454	111 aa	Known RBP	4.22	□□□□□ -1.73
FN1-222	ENST00000485567	MMP2	P08253	660 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	CLTB	P09497	229 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	ETFA	P13804	333 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	RRM1	P23921	792 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	ZBED6	P86452	979 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	TFAP4	Q01664	338 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	FAM27E3	Q08E93	113 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	GRIK3	Q13003	919 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	SOWAHA	Q2M3V2	549 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	COL28A1	Q2UY09	1125 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	SGO1	Q5FBB7	561 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.22	□□□□□ -1.73
FN1-222	ENST00000485567	ASPHD1	Q5U4P2	390 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	PMS2CL	Q68D20	193 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	GPR139	Q6DWJ6	353 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	HEPHL1	Q6MZM0	1159 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	LRRC8E	Q6NSJ5	796 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	TRIL	Q7L0X0	811 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	GET4	Q7L5D6	327 aa	Predicted RBP	4.22	□□□□□ -1.73
FN1-222	ENST00000485567	LINGO2	Q7L985	606 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	KRT77	Q7Z794	578 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	ADGRA1	Q86SQ6	560 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	CREBRF	Q8IUR6	639 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	WDR63	Q8IWG1	891 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	FAM217A	Q8IXS0	508 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	TEX11	Q8IYF3	940 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	RNF168	Q8IYW5	571 aa	Predicted RBP	4.22	□□□□□ -1.73
FN1-222	ENST00000485567	LRRC57	Q8N9N7	239 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	TEX45	Q8NA69	505 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	TMEM163	Q8TC26	289 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	MSI2	Q96DH6	328 aa	Known RBP	4.22	□□□□□ -1.73
FN1-222	ENST00000485567	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.22	□□□□□ -1.73
FN1-222	ENST00000485567	SEPT5	Q99719	369 aa	Predicted RBP	4.22	□□□□□ -1.73
FN1-222	ENST00000485567	TXLNGY	Q9BZA5	131 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	R3HDML	Q9H3Y0	253 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	KLHL31	Q9H511	634 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	AAMDC	Q9H7C9	122 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	RANGRF	Q9HD47	186 aa	Predicted RBP	4.22	□□□□□ -1.73
FN1-222	ENST00000485567	PDE7B	Q9NP56	450 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	GIMAP4	Q9NUV9	329 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	FBXL17	Q9UF56	701 aa		4.22	□□□□□ -1.73
FN1-222	ENST00000485567	STMND1	H3BQB6	276 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	ATG13	O75143	517 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	ENTPD3	O75355	529 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	DAB1	O75553	588 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	NUDT3	O95989	172 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	FSHB	P01225	129 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	CHAT	P28329	748 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	DCTD	P32321	178 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	CLCN5	P51795	746 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	ZNF91	Q05481	1191 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	PCLAF	Q15004	111 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	NTRK2	Q16620	822 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	ASTE1	Q2TB18	679 aa	Predicted RBP	4.21	□□□□□ -1.74
FN1-222	ENST00000485567	PCGF3	Q3KNV8	242 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	ZSCAN23	Q3MJ62	389 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	ESCO2	Q56NI9	601 aa		4.21	□□□□□ -1.74
FN1-222	ENST00000485567	DCAF6	Q58WW2	860 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms