RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 MRFAP1L1Q96HT8 127 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 LENG8Q96PV6 779 aaPredicted RBP12.37□□□□□ -0.43
MSH5-216ENST00000484309 NOD2Q9HC29 1040 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 LCMT1Q9UIC8 334 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 TTLL3Q9Y4R7 772 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 EPG5Q9HCE0 2579 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 USP24Q9UPU5 2620 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 SOWAHDA6NJG2 315 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 TRAFD1O14545 582 aaPredicted RBP12.36□□□□□ -0.43
MSH5-216ENST00000484309 ENC1O14682 589 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 SPOPO43791 374 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 LZTS3O60299 673 aaPredicted RBP12.36□□□□□ -0.43
MSH5-216ENST00000484309 PIAS2O75928 621 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 TRIM16O95361 564 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 LDOC1O95751 146 aaPredicted RBP12.36□□□□□ -0.43
MSH5-216ENST00000484309 CR2P20023 1033 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 COMTP21964 271 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 HSPA9P38646 679 aaKnown RBP12.36□□□□□ -0.43
MSH5-216ENST00000484309 ARHGAP25P42331 645 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 RABIFP47224 123 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 THOP1P52888 689 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 CLDN6P56747 220 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 SLC10A2Q12908 348 aaPredicted RBP12.36□□□□□ -0.43
MSH5-216ENST00000484309 RALGDSQ12967 914 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 LLGL1Q15334 1064 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 ZSCAN30Q86W11 494 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 SLC25A45Q8N413 288 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 HCAR2Q8TDS4 363 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 ASB12Q8WXK4 309 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 ECHDC3Q96DC8 303 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 RNF157Q96PX1 679 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 NUDCD1Q96RS6 583 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 MGME1Q9BQP7 344 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 GPR27Q9NS67 375 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 INTUQ9ULD6 942 aa12.36□□□□□ -0.43
MSH5-216ENST00000484309 SPTY2D1-AS1A0A0U1RR47 76 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.35□□□□□ -0.43
MSH5-216ENST00000484309 C3orf70A6NLC5 250 aaPredicted RBP12.35□□□□□ -0.43
MSH5-216ENST00000484309 TRIM38O00635 465 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 SIGLEC6O43699 453 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 NEBLO76041 1014 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 CPP00450 1065 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 PCCBP05166 539 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 ELFN1P0C7U0 828 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 MYF5P13349 255 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 DGKAP23743 735 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 SUOXP51687 545 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 PFN3P60673 137 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 DYNLT1P63172 113 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 DSC2Q02487 901 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 EIF2B5Q13144 721 aaKnown RBP12.35□□□□□ -0.43
MSH5-216ENST00000484309 LRRC14Q15048 493 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 PTPRRQ15256 657 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 TCEA2Q15560 299 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 IFI16Q16666 785 aaKnown RBP12.35□□□□□ -0.43
MSH5-216ENST00000484309 WSCD2Q2TBF2 565 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 DENND2CQ68D51 928 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 DHRS13Q6UX07 377 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 NPNTQ6UXI9 565 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 NYAP1Q6ZVC0 841 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 B4GALNT4Q76KP1 1039 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 DPPA4Q7L190 304 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 PARGQ86W56 976 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 RFX6Q8HWS3 928 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 RBFAQ8N0V3 343 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 PLD5Q8N7P1 536 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 CCNYQ8ND76 341 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 FAM174AQ8TBP5 190 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.35□□□□□ -0.43
MSH5-216ENST00000484309 SMIM14Q96QK8 99 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 SEMA3CQ99985 751 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 C1QTNF7Q9BXJ2 289 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 TCEAL2Q9H3H9 227 aaPredicted RBP12.35□□□□□ -0.43
MSH5-216ENST00000484309 DTLQ9NZJ0 730 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 B4GALT6Q9UBX8 382 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 KLF15Q9UIH9 416 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 PNMA8BQ9ULN7 279 aaPredicted RBP12.35□□□□□ -0.43
MSH5-216ENST00000484309 NEUROG3Q9Y4Z2 214 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 PCDHA13Q9Y5I0 950 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 HEY1Q9Y5J3 304 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 ZFC3H1O60293 1989 aaKnown RBP12.35□□□□□ -0.43
MSH5-216ENST00000484309 CACNA1BQ00975 2339 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 ASXL3Q9C0F0 2248 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 RP1P56715 2156 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 FRYQ5TBA9 3013 aa12.35□□□□□ -0.43
MSH5-216ENST00000484309 A0A0U1RQS6 177 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 FAM149AA5PLN7 773 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 APOL1O14791 398 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 SCAMP1O15126 338 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 SOCS5O75159 536 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 LCA5LO95447 670 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 HLA-DQB2P05538 268 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 NME1P15531 152 aaKnown RBP12.34□□□□□ -0.43
MSH5-216ENST00000484309 CTPS1P17812 591 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 CYLC1P35663 651 aaPredicted RBP12.34□□□□□ -0.43
MSH5-216ENST00000484309 MARCKSL1P49006 195 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 POLR2LP62875 67 aaKnown RBP12.34□□□□□ -0.43
MSH5-216ENST00000484309 ACOX1Q15067 660 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 SPA17Q15506 151 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 ODF2Q5BJF6 829 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms