RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 KLHL8Q9P2G9 620 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 EBF1Q9UH73 591 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 GGA2Q9UJY4 613 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 STOML2Q9UJZ1 356 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 CYP8B1Q9UNU6 501 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 ZNF510Q9Y2H8 683 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 HS3ST4Q9Y661 456 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 GON4LQ3T8J9 2241 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 TCRBV7S3A2A0A539 114 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 ERI2A8K979 691 aaKnown RBP7.02□□□□□ -1.29
BRCA1-216ENST00000484087 KCNU1A8MYU2 1149 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 FAM72CH0Y354 149 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 PSMD3O43242 534 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 PAGE1O75459 146 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 NEBLO76041 1014 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 EPHX1P07099 455 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 MLNP12872 115 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 KRT15P19012 456 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 MZF1P28698 734 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-216ENST00000484087 ELK3P41970 407 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 PTGER3P43115 390 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 MSH2P43246 934 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 SLC11A2P49281 568 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 COPAP53621 1224 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 NRLP54845 237 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 GUCY1A3Q02108 690 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 NRG1Q02297 640 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-216ENST00000484087 RING1Q06587 406 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 PPIDQ08752 370 aaKnown RBP7.02□□□□□ -1.29
BRCA1-216ENST00000484087 GALNT2Q10471 571 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 CBLBQ13191 982 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 RASA2Q15283 850 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 PLK5Q496M5 336 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 FNDC3BQ53EP0 1204 aaKnown RBP7.02□□□□□ -1.29
BRCA1-216ENST00000484087 ALFQ53S48 1182 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 EOGTQ5NDL2 527 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 HP1BP3Q5SSJ5 553 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-216ENST00000484087 FNBP1LQ5T0N5 605 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 LGSNQ5TDP6 509 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 FAM72AQ5TYM5 149 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 MBLAC2Q68D91 279 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 FAM72DQ6L9T8 149 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 TIGD7Q6NT04 549 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-216ENST00000484087 FBXL22Q6P050 247 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 CAPN12Q6ZSI9 719 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 PID1Q7Z2X4 250 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 TFAP2DQ7Z6R9 452 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 FAM124AQ86V42 546 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 FAM72BQ86X60 149 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 LRRC49Q8IUZ0 686 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 CCNJLQ8IV13 435 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 ATPAF2Q8N5M1 289 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 HJURPQ8NCD3 748 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-216ENST00000484087 DYDC1Q8WWB3 177 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 RMDN1Q96DB5 314 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 MYO19Q96H55 970 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 LMLNQ96KR4 655 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 C1orf74Q96LT6 269 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 CYTH2Q99418 400 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 GABRG3Q99928 467 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 NAT9Q9BTE0 207 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 FAM126AQ9BYI3 521 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-216ENST00000484087 EIF2B3Q9NR50 452 aaKnown RBP7.02□□□□□ -1.29
BRCA1-216ENST00000484087 ELOVL2Q9NXB9 296 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 MPP6Q9NZW5 540 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 PSMC3IPQ9P2W1 217 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-216ENST00000484087 LGALS13Q9UHV8 139 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 CHMP2BQ9UQN3 213 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 SLC27A6Q9Y2P4 619 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 ACTL7BQ9Y614 415 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 ACTL7AQ9Y615 435 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 SLCO1B1Q9Y6L6 691 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 TMEM131Q92545 1883 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 DOCK9Q9BZ29 2069 aa7.02□□□□□ -1.29
BRCA1-216ENST00000484087 IQANK1A0A1B0GTG1 560 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 ERICH4A6NGS2 130 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 TTC34A8MYJ7 566 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 RASA4BC9J798 803 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 E9PAM4 449 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 F5H5T6 163 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 H0Y626 953 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 DFFAO00273 331 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 RASA4O43374 803 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 LUC7L3O95232 432 aaKnown RBP7.01□□□□□ -1.29
BRCA1-216ENST00000484087 METTL18O95568 372 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 LATS1O95835 1130 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 INHBAP08476 426 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 GLDCP23378 1020 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 CCNCP24863 283 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 LSP1P33241 339 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 SOX11P35716 441 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 P2RY2P41231 377 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 GARSP41250 739 aaKnown RBP7.01□□□□□ -1.29
BRCA1-216ENST00000484087 MMP13P45452 471 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 DHPSP49366 369 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-216ENST00000484087 METAP1P53582 386 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 IFI35P80217 286 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-216ENST00000484087 GUCA2AQ02747 115 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 CREB5Q02930 508 aa7.01□□□□□ -1.29
BRCA1-216ENST00000484087 CDH18Q13634 790 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms