RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SFTPA2Q8IWL1 248 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 BTN2A2Q8WVV5 523 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 NCAPGQ9BPX3 1015 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 APOOQ9BUR5 198 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 SLC13A1Q9BZW2 595 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 POLR1BQ9H9Y6 1135 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 CWC15Q9P013 229 aaKnown RBP18.16■□□□□ 0.5
ATG4B-221ENST00000483778 RABGEF1Q9UJ41 708 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 SATB2Q9UPW6 733 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 SCN8AQ9UQD0 1980 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 A8MX80 341 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 ANXA6P08133 673 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 GM2AP17900 193 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 XPAP23025 273 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-221ENST00000483778 MMP12P39900 470 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 RALGDSQ12967 914 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 PPP6R3Q5H9R7 873 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-221ENST00000483778 C6orf132Q5T0Z8 1188 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 PCSK4Q6UW60 755 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 ENPP7Q6UWV6 458 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 RFX8Q6ZV50 586 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 PELI3Q8N2H9 469 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 HCAR2Q8TDS4 363 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 ZNF641Q96N77 438 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-221ENST00000483778 FCRL3Q96P31 734 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-221ENST00000483778 ETNK2Q9NVF9 386 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 AIPL1Q9NZN9 384 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 SIRPGQ9P1W8 387 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 GULP1Q9UBP9 304 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 PADI4Q9UM07 663 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 MYO6Q9UM54 1294 aa18.15■□□□□ 0.5
ATG4B-221ENST00000483778 CFAP46Q8IYW2 2715 aa18.14■□□□□ 0.5
ATG4B-221ENST00000483778 ARHGAP42A6NI28 874 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 DFFAO00273 331 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 LZTS3O60299 673 aaPredicted RBP18.14■□□□□ 0.49
ATG4B-221ENST00000483778 PALMO75781 387 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 C1QL1O75973 258 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 DXOO77932 396 aaKnown RBP18.14■□□□□ 0.49
ATG4B-221ENST00000483778 IL1R2P27930 398 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 HK3P52790 923 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 PDX1P52945 283 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 ELP6Q0PNE2 266 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 PTPRRQ15256 657 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 ASIC2Q16515 512 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 C3orf38Q5JPI3 329 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 KYQ8NBH2 561 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 ZNF578Q96N58 590 aaPredicted RBP18.14■□□□□ 0.49
ATG4B-221ENST00000483778 C1QTNF7Q9BXJ2 289 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 CPNE5Q9HCH3 593 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 CNOT8Q9UFF9 292 aaKnown RBP18.14■□□□□ 0.49
ATG4B-221ENST00000483778 ATP8A1Q9Y2Q0 1164 aa18.14■□□□□ 0.49
ATG4B-221ENST00000483778 HELZ2Q9BYK8 2649 aaKnown RBP18.14■□□□□ 0.49
ATG4B-221ENST00000483778 DAPK3O43293 454 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 LRCH4O75427 683 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 PCCBP05166 539 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 CCDC172P0C7W6 258 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 AMPD1P23109 780 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 HTR7P34969 479 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 CSNK1DP48730 415 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 PEX5P50542 639 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 SUOXP51687 545 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 SRP54P61011 504 aaKnown RBP18.13■□□□□ 0.49
ATG4B-221ENST00000483778 DPYSQ14117 519 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 TXNRD3NBQ6F5E7 133 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 LIPIQ6XZB0 460 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 PCDH19Q8TAB3 1148 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 OR1E3Q8WZA6 343 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 ECHDC3Q96DC8 303 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 TBATAQ96M53 351 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 UBL7Q96S82 380 aaPredicted RBP18.13■□□□□ 0.49
ATG4B-221ENST00000483778 LGMNQ99538 433 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 CCDC3Q9BQI4 270 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 MYO1AQ9UBC5 1043 aa18.13■□□□□ 0.49
ATG4B-221ENST00000483778 TMEM202A6NGA9 273 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 TRAFD1O14545 582 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-221ENST00000483778 CXADRP78310 365 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 SLC10A7Q0GE19 358 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 NFATC4Q14934 902 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 AGERQ15109 404 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 BRAT1Q6PJG6 821 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 B3GNT8Q7Z7M8 397 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 PGBD5Q8N414 524 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 SLC39A7Q92504 469 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 PDXPQ96GD0 296 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 SLC46A1Q96NT5 459 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 TUBGCP5Q96RT8 1024 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 LGR4Q9BXB1 951 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 EDEM3Q9BZQ6 932 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 MRPL40Q9NQ50 206 aaKnown RBP18.12■□□□□ 0.49
ATG4B-221ENST00000483778 EVA1BQ9NVM1 165 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 NCKIPSDQ9NZQ3 722 aa18.12■□□□□ 0.49
ATG4B-221ENST00000483778 NTN3O00634 580 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-221ENST00000483778 TOR1BO14657 336 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 ATXN7O15265 892 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-221ENST00000483778 PRPSAP2O60256 369 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 RNF8O76064 485 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 RECQL5O94762 991 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-221ENST00000483778 PEX11BO96011 259 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 GZMAP12544 262 aa18.11■□□□□ 0.49
ATG4B-221ENST00000483778 CTSEP14091 401 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms