RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 HLA-BQ31612 363 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 SLC45A4Q5BKX6 768 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 AADACL2Q6P093 401 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 ERAP2Q6P179 960 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 IL27RAQ6UWB1 636 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 TMEM145Q8NBT3 493 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 HERPUD2Q9BSE4 406 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 SLC17A9Q9BYT1 436 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 GAREM1Q9H706 876 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 FNDC3AQ9Y2H6 1198 aaKnown RBP13.5□□□□□ -0.25
SSR1-208ENST00000483409 ATP8A1Q9Y2Q0 1164 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 H0Y8X5 98 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 RIOK3O14730 519 aaKnown RBP13.49□□□□□ -0.25
SSR1-208ENST00000483409 RAD51BO15315 384 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 HTRA2O43464 458 aaPredicted RBP13.49□□□□□ -0.25
SSR1-208ENST00000483409 KRT86O43790 486 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 CCDC175P0C221 793 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 MMP12P39900 470 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 CTSKP43235 329 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 NR2C2P49116 596 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 SUOXP51687 545 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 COPS2P61201 443 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 FAM193AP78312 1265 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 IFI35P80217 286 aaPredicted RBP13.49□□□□□ -0.25
SSR1-208ENST00000483409 ZNF211Q13398 564 aaPredicted RBP13.49□□□□□ -0.25
SSR1-208ENST00000483409 TMEM52BQ4KMG9 183 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 RALGPS1Q5JS13 557 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 CCDC181Q5TID7 509 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 RNF10Q8N5U6 811 aaKnown RBP13.49□□□□□ -0.25
SSR1-208ENST00000483409 UBL4BQ8N7F7 174 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 MFSD2AQ8NA29 543 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 P3H4Q92791 437 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 SKA1Q96BD8 255 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 LZTFL1Q9NQ48 299 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 DNAAF2Q9NVR5 837 aaKnown RBP13.49□□□□□ -0.25
SSR1-208ENST00000483409 HAUS2Q9NVX0 235 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 COQ6Q9Y2Z9 468 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 PCDHB9Q9Y5E1 797 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 RAI2Q9Y5P3 530 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 PCNX2A6NKB5 2137 aa13.49□□□□□ -0.25
SSR1-208ENST00000483409 A8MX80 341 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 TLR4O00206 839 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 TM4SF5O14894 197 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 DDX3YO15523 660 aaKnown RBP13.48□□□□□ -0.25
SSR1-208ENST00000483409 TM7SF2O76062 418 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 PGLSO95336 258 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 CPP00450 1065 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 PYGMP11217 842 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 C6P13671 934 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 IL9RQ01113 521 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 NIPAL4Q0D2K0 466 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 IHHQ14623 411 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 PRKD1Q15139 912 aaPredicted RBP13.48□□□□□ -0.25
SSR1-208ENST00000483409 PRAMEF14Q5SWL7 426 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 ALG1LQ6GMV1 187 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 GCNT7Q6ZNI0 430 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 BBS12Q6ZW61 710 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 BZW1Q7L1Q6 419 aaKnown RBP13.48□□□□□ -0.25
SSR1-208ENST00000483409 DGLUCYQ7Z3D6 616 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 PTAR1Q7Z6K3 402 aaPredicted RBP13.48□□□□□ -0.25
SSR1-208ENST00000483409 ZC3H18Q86VM9 953 aaKnown RBP13.48□□□□□ -0.25
SSR1-208ENST00000483409 ZSCAN30Q86W11 494 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 CNTD1Q8N815 330 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 TFB1MQ8WVM0 346 aaKnown RBP13.48□□□□□ -0.25
SSR1-208ENST00000483409 AGAP3Q96P47 875 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 IL12RB2Q99665 862 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 C1QTNF2Q9BXJ5 285 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 OSBPL8Q9BZF1 889 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 BRD8Q9H0E9 1235 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 GDF3Q9NR23 364 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 AMACRQ9UHK6 382 aa13.48□□□□□ -0.25
SSR1-208ENST00000483409 A0A1W2PQ67 120 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 POM121BA6NF01 834 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 A6NNZ2 444 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 MIF4GDA9UHW6 222 aaKnown RBP13.47□□□□□ -0.25
SSR1-208ENST00000483409 APOC4-APOC2K7ER74 178 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 APOC2P02655 101 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 PDHA1P08559 390 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 THEGLP0DJG4 465 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 PTPN7P35236 360 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 CETN2P41208 172 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 CD86P42081 329 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 LIG3P49916 1009 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 NXPH1P58417 271 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 POLR2LP62875 67 aaKnown RBP13.47□□□□□ -0.25
SSR1-208ENST00000483409 RALGDSQ12967 914 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 ZNF423Q2M1K9 1284 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 ARMC12Q5T9G4 340 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 KDM7AQ6ZMT4 941 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 DPPA4Q7L190 304 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 IQCHQ86VS3 1027 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 SPATS2Q86XZ4 545 aaKnown RBP13.47□□□□□ -0.25
SSR1-208ENST00000483409 OR13H1Q8NG92 308 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 ARRDC2Q8TBH0 407 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 KLHDC7BQ96G42 594 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 KLF6Q99612 283 aaPredicted RBP13.47□□□□□ -0.25
SSR1-208ENST00000483409 TM7SF3Q9NS93 570 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 B4GALT6Q9UBX8 382 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 PHTF1Q9UMS5 762 aa13.47□□□□□ -0.25
SSR1-208ENST00000483409 GOLGA8CPA6NN73 597 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms