RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 HES3Q5TGS1 186 aa20.04■□□□□ 0.8
MSH5-215ENST00000482280 ZCCHC8Q6NZY4 707 aaKnown RBP20.04■□□□□ 0.8
MSH5-215ENST00000482280 MACC1Q6ZN28 852 aa20.04■□□□□ 0.8
MSH5-215ENST00000482280 DNAJC7Q99615 494 aa20.04■□□□□ 0.8
MSH5-215ENST00000482280 COQ6Q9Y2Z9 468 aa20.04■□□□□ 0.8
MSH5-215ENST00000482280 TRPM6Q9BX84 2022 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 SSU72P8A0A1W2PR75 194 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 TRABD2BA6NFA1 517 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 SRRM3A6NNA2 597 aaPredicted RBP20.03■□□□□ 0.8
MSH5-215ENST00000482280 CTSEP14091 401 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 MMP12P39900 470 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 MMP13P45452 471 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 RPIAP49247 311 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 PEX5P50542 639 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 PPARDQ03181 441 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 ITKQ08881 620 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 PDK2Q15119 407 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 IRF4Q15306 451 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 TXNRD3NBQ6F5E7 133 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 PROSER1Q86XN7 944 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 PHACTR4Q8IZ21 702 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 NDUFAF2Q8N183 169 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 TP53I13Q8NBR0 393 aaPredicted RBP20.03■□□□□ 0.8
MSH5-215ENST00000482280 SCG3Q8WXD2 468 aaKnown RBP20.03■□□□□ 0.8
MSH5-215ENST00000482280 NXPE2Q96DL1 559 aa20.03■□□□□ 0.8
MSH5-215ENST00000482280 MAP1BP46821 2468 aaKnown RBP20.02■□□□□ 0.8
MSH5-215ENST00000482280 CFAP69A5D8W1 941 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 K7ESM1 405 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 SOCS5O75159 536 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 PROSCO94903 275 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 PCCBP05166 539 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 ANXA6P08133 673 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 TMEM253P0C7T8 217 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 CKMT1AP12532 417 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 PRRT3Q5FWE3 981 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 RALGPS1Q5JS13 557 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 TIGD7Q6NT04 549 aaPredicted RBP20.02■□□□□ 0.8
MSH5-215ENST00000482280 CNGA4Q8IV77 575 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 VSTM4Q8IW00 320 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 MDM1Q8TC05 714 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 VOPP1Q96AW1 172 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 APOLD1Q96LR9 279 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 ZNF830Q96NB3 372 aaPredicted RBP20.02■□□□□ 0.8
MSH5-215ENST00000482280 NUDCD1Q96RS6 583 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 MBNL1Q9NR56 388 aaKnown RBP20.02■□□□□ 0.8
MSH5-215ENST00000482280 ABHD10Q9NUJ1 306 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 ETNK2Q9NVF9 386 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 CLCA2Q9UQC9 943 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 EPG5Q9HCE0 2579 aa20.02■□□□□ 0.8
MSH5-215ENST00000482280 MAFKO60675 156 aa20.01■□□□□ 0.79
MSH5-215ENST00000482280 CPP00450 1065 aa20.01■□□□□ 0.79
MSH5-215ENST00000482280 PRKCGP05129 697 aa20.01■□□□□ 0.79
MSH5-215ENST00000482280 TARDBPQ13148 414 aaKnown RBP eCLIP20.01■□□□□ 0.79
MSH5-215ENST00000482280 INPP5AQ14642 412 aa20.01■□□□□ 0.79
MSH5-215ENST00000482280 ACOX1Q15067 660 aa20.01■□□□□ 0.79
MSH5-215ENST00000482280 ELOCQ15369 112 aa20.01■□□□□ 0.79
MSH5-215ENST00000482280 MARCH9Q86YJ5 346 aa20.01■□□□□ 0.79
MSH5-215ENST00000482280 TP53INP2Q8IXH6 220 aa20.01■□□□□ 0.79
MSH5-215ENST00000482280 FAM181AQ8N9Y4 354 aa20.01■□□□□ 0.79
MSH5-215ENST00000482280 ECHDC3Q96DC8 303 aa20.01■□□□□ 0.79
MSH5-215ENST00000482280 ZNF670Q9BS34 389 aa20.01■□□□□ 0.79
MSH5-215ENST00000482280 AK5Q9Y6K8 562 aa20.01■□□□□ 0.79
MSH5-215ENST00000482280 CACNB4O00305 520 aaPredicted RBP20■□□□□ 0.79
MSH5-215ENST00000482280 TPP1O14773 563 aa20■□□□□ 0.79
MSH5-215ENST00000482280 MUSKO15146 869 aa20■□□□□ 0.79
MSH5-215ENST00000482280 MFAP3LO75121 409 aa20■□□□□ 0.79
MSH5-215ENST00000482280 RASGRP1O95267 797 aa20■□□□□ 0.79
MSH5-215ENST00000482280 GP1BAP07359 652 aa20■□□□□ 0.79
MSH5-215ENST00000482280 ALPIP09923 528 aa20■□□□□ 0.79
MSH5-215ENST00000482280 CYP2A6P11509 494 aaPredicted RBP20■□□□□ 0.79
MSH5-215ENST00000482280 KELP23276 732 aa20■□□□□ 0.79
MSH5-215ENST00000482280 SEMG2Q02383 582 aa20■□□□□ 0.79
MSH5-215ENST00000482280 CYP4F3Q08477 520 aa20■□□□□ 0.79
MSH5-215ENST00000482280 EIF2B5Q13144 721 aaKnown RBP20■□□□□ 0.79
MSH5-215ENST00000482280 MMRN1Q13201 1228 aa20■□□□□ 0.79
MSH5-215ENST00000482280 MTM1Q13496 603 aa20■□□□□ 0.79
MSH5-215ENST00000482280 MESDQ14696 234 aa20■□□□□ 0.79
MSH5-215ENST00000482280 WSCD2Q2TBF2 565 aa20■□□□□ 0.79
MSH5-215ENST00000482280 DEFB133Q30KQ1 61 aa20■□□□□ 0.79
MSH5-215ENST00000482280 ESRP1Q6NXG1 681 aaKnown RBP20■□□□□ 0.79
MSH5-215ENST00000482280 ENPP7Q6UWV6 458 aa20■□□□□ 0.79
MSH5-215ENST00000482280 DPPA4Q7L190 304 aa20■□□□□ 0.79
MSH5-215ENST00000482280 RD3Q7Z3Z2 195 aa20■□□□□ 0.79
MSH5-215ENST00000482280 HID1Q8IV36 788 aa20■□□□□ 0.79
MSH5-215ENST00000482280 FSTL5Q8N475 847 aaPredicted RBP20■□□□□ 0.79
MSH5-215ENST00000482280 TRAF3IP1Q8TDR0 691 aaPredicted RBP20■□□□□ 0.79
MSH5-215ENST00000482280 TBATAQ96M53 351 aa20■□□□□ 0.79
MSH5-215ENST00000482280 MGME1Q9BQP7 344 aa20■□□□□ 0.79
MSH5-215ENST00000482280 APOOQ9BUR5 198 aa20■□□□□ 0.79
MSH5-215ENST00000482280 KCTD5Q9NXV2 234 aa20■□□□□ 0.79
MSH5-215ENST00000482280 KLQ9UEF7 1012 aa20■□□□□ 0.79
MSH5-215ENST00000482280 SALL4Q9UJQ4 1053 aa20■□□□□ 0.79
MSH5-215ENST00000482280 TTLL3Q9Y4R7 772 aa20■□□□□ 0.79
MSH5-215ENST00000482280 PCDHGC4Q9Y5F7 938 aa20■□□□□ 0.79
MSH5-215ENST00000482280 A8MX80 341 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 RECQL5O94762 991 aaPredicted RBP19.99■□□□□ 0.79
MSH5-215ENST00000482280 MX2P20592 715 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 CA4P22748 312 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 MAN1A1P33908 653 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 ADKP55263 362 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms