RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 MYLKQ15746 1914 aa9.8□□□□□ -0.84
TMEM39A-207ENST00000482162 EME2A4GXA9 379 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 H3BM21 787 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 H3BRJ5 948 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 FFAR2O15552 330 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 DAPK3O43293 454 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 AQP9O43315 295 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 GCATO75600 419 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 NEBLO76041 1014 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 MT-CO3P00414 261 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 ALPPL2P10696 532 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 C6P13671 934 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 GM2AP17900 193 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 AMPD1P23109 780 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 TRIM23P36406 574 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 HSPA9P38646 679 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 EIF4A3P38919 411 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 LIG3P49916 1009 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 DUSP3P51452 185 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 RENBPP51606 427 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 POLR2LP62875 67 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 LRRC14Q15048 493 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 IRF4Q15306 451 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 ZSCAN23Q3MJ62 389 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 PPP6R3Q5H9R7 873 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 ALKBH5Q6P6C2 394 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 LVRNQ6Q4G3 990 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 LIPIQ6XZB0 460 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 VPS36Q86VN1 386 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 LRRC49Q8IUZ0 686 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 PGBD5Q8N414 524 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 TEX26Q8N6G2 289 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 CXorf40AQ8TE69 158 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 FATE1Q969F0 183 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 NXPE2Q96DL1 559 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 WRAP53Q9BUR4 548 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 LRRC61Q9BV99 259 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 CLPBQ9H078 707 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 TCEAL2Q9H3H9 227 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 ATP13A3Q9H7F0 1226 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 ZWILCHQ9H900 591 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 PCDH18Q9HCL0 1135 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 MYO1AQ9UBC5 1043 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 SPASTQ9UBP0 616 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 IP6K2Q9UHH9 426 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 LHX6Q9UPM6 363 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 LUC7L2Q9Y383 392 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 PPIL1Q9Y3C6 166 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 RP1P56715 2156 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 ADAMTS20P59510 1910 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 PTPRQQ9UMZ3 2332 aa9.79□□□□□ -0.84
TMEM39A-207ENST00000482162 NBEAQ8NFP9 2946 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 A0A1W2PQ67 120 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 YY2O15391 372 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 SOCS5O75159 536 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 DXOO77932 396 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 MYF5P13349 255 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 SERPINA4P29622 427 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 THOP1P52888 689 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 TPM4P67936 248 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 DAB2P98082 770 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 MTM1Q13496 603 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 INPP5AQ14642 412 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 LBRQ14739 615 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 ALG11Q2TAA5 492 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 HS1BP3Q53T59 392 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 RALGPS1Q5JS13 557 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 ERAP2Q6P179 960 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 IGF2-ASQ6U949 168 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 PHACTR4Q8IZ21 702 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 RBFAQ8N0V3 343 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 SNIP1Q8TAD8 396 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 GRAMD1AQ96CP6 724 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 NUDCD1Q96RS6 583 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 MGME1Q9BQP7 344 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 APOOQ9BUR5 198 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 NUP85Q9BW27 656 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 CINPQ9BW66 212 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 SP110Q9HB58 689 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 IFNKQ9P0W0 207 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 DGKBQ9Y6T7 804 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 LRRK1Q38SD2 2015 aa9.78□□□□□ -0.84
TMEM39A-207ENST00000482162 WDFY3Q8IZQ1 3526 aa9.77□□□□□ -0.84
TMEM39A-207ENST00000482162 FASNP49327 2511 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 MYO1FO00160 1098 aa9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 DFFAO00273 331 aa9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 TNFRSF10CO14798 259 aa9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 TLX3O43711 291 aaPredicted RBP9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 RECQL5O94762 991 aaPredicted RBP9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 TSHRP16473 764 aa9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 XPAP23025 273 aaPredicted RBP9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 ARL4AP40617 200 aa9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 EIF2S3P41091 472 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 LSSP48449 732 aa9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 SCNN1BP51168 640 aa9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 BLKP51451 505 aa9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 HK3P52790 923 aa9.77□□□□□ -0.85
TMEM39A-207ENST00000482162 PPARDQ03181 441 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms