RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 A0A1B0GTW7 788 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 RIOK3O14730 519 aaKnown RBP20.49■□□□□ 0.87
CTSA-206ENST00000480961 KCNN4O15554 427 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 CEP104O60308 925 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 LRP3O75074 770 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 PGLSO95336 258 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 PAK4O96013 591 aaPredicted RBP20.49■□□□□ 0.87
CTSA-206ENST00000480961 SERPINF2P08697 491 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 CTPS1P17812 591 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 CES1P23141 567 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 CD68P34810 354 aaPredicted RBP20.49■□□□□ 0.87
CTSA-206ENST00000480961 RPS21P63220 83 aaKnown RBP20.49■□□□□ 0.87
CTSA-206ENST00000480961 FGL2Q14314 439 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 TMEM259Q4ZIN3 620 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 ARMC12Q5T9G4 340 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 ERAP2Q6P179 960 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 NEK5Q6P3R8 708 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 PRR23CQ6ZRP0 262 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 PID1Q7Z2X4 250 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 C1orf54Q8WWF1 131 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 IMP4Q96G21 291 aaKnown RBP20.49■□□□□ 0.87
CTSA-206ENST00000480961 SLC25A51Q9H1U9 297 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 AASDHPPTQ9NRN7 309 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 UBP1Q9NZI7 540 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 JRKLQ9Y4A0 524 aa20.49■□□□□ 0.87
CTSA-206ENST00000480961 SPAG17Q6Q759 2223 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 A0A0U1RQS6 177 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 MTSS1O43312 755 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 GDF9O60383 454 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 ATP1A1P05023 1023 aaKnown RBP20.48■□□□□ 0.87
CTSA-206ENST00000480961 NFKB1P19838 968 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 DPP6P42658 865 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 POLR2LP62875 67 aaKnown RBP20.48■□□□□ 0.87
CTSA-206ENST00000480961 PCSK7Q16549 785 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 SETMARQ53H47 684 aaPredicted RBP20.48■□□□□ 0.87
CTSA-206ENST00000480961 C12orf50Q8NA57 414 aaPredicted RBP20.48■□□□□ 0.87
CTSA-206ENST00000480961 TTC13Q8NBP0 860 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 CEP76Q8TAP6 659 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 CXorf40AQ8TE69 158 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 SLC17A9Q9BYT1 436 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 SUSD2Q9UGT4 822 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 DNPEPQ9ULA0 475 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 SLC6A14Q9UN76 642 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 COQ6Q9Y2Z9 468 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 FAM186AA6NE01 2351 aa20.48■□□□□ 0.87
CTSA-206ENST00000480961 A0A1B0GVT2 93 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 RAD51BO15315 384 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 FZD6O60353 706 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 MT-CYBP00156 380 aaPredicted RBP20.47■□□□□ 0.87
CTSA-206ENST00000480961 ALPIP09923 528 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 HOXD12P35452 270 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 MMP12P39900 470 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 LIG3P49916 1009 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 CLDN2P57739 230 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 ELP6Q0PNE2 266 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 SGCGQ13326 291 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 SNX1Q13596 522 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 TMEM52BQ4KMG9 183 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 AASDHQ4L235 1098 aaPredicted RBP20.47■□□□□ 0.87
CTSA-206ENST00000480961 KIAA1161Q6NSJ0 714 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 SLC23A3Q6PIS1 610 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 FAM71DQ8N9W8 422 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 OR2I1PQ8NGU4 316 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 PIH1D2Q8WWB5 315 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 GTPBP2Q9BX10 602 aaKnown RBP20.47■□□□□ 0.87
CTSA-206ENST00000480961 NUSAP1Q9BXS6 441 aaKnown RBP20.47■□□□□ 0.87
CTSA-206ENST00000480961 TDRD1Q9BXT4 1180 aaKnown RBP20.47■□□□□ 0.87
CTSA-206ENST00000480961 USP29Q9HBJ7 922 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 PCDH9Q9HC56 1237 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 CAPN10Q9HC96 672 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 B4GALT6Q9UBX8 382 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 PHTF1Q9UMS5 762 aa20.47■□□□□ 0.87
CTSA-206ENST00000480961 SHROOM3Q8TF72 1996 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 LNP1A1A4G5 178 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 PMPCBO75439 489 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 PRLP01236 227 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 FGGP02679 453 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 WNT1P04628 370 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 HOXD11P31277 338 aaPredicted RBP20.46■□□□□ 0.87
CTSA-206ENST00000480961 SUOXP51687 545 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 AFF3P51826 1226 aaKnown RBP20.46■□□□□ 0.87
CTSA-206ENST00000480961 GNG11P61952 73 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 BNC1Q01954 994 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 NAPEPLDQ6IQ20 393 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 KDM7AQ6ZMT4 941 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 LPCAT1Q8NF37 534 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 SLC35B2Q8TB61 432 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 CCDC110Q8TBZ0 833 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 MS4A14Q96JA4 679 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 C1QTNF2Q9BXJ5 285 aa20.46■□□□□ 0.87
CTSA-206ENST00000480961 PRAMEF26H0Y7S4 382 aa20.45■□□□□ 0.86
CTSA-206ENST00000480961 H0Y8X5 98 aa20.45■□□□□ 0.86
CTSA-206ENST00000480961 ENGP17813 658 aa20.45■□□□□ 0.86
CTSA-206ENST00000480961 HNF1BP35680 557 aa20.45■□□□□ 0.86
CTSA-206ENST00000480961 EPHB1P54762 984 aa20.45■□□□□ 0.86
CTSA-206ENST00000480961 RACK1P63244 317 aaKnown RBP20.45■□□□□ 0.86
CTSA-206ENST00000480961 RALGDSQ12967 914 aa20.45■□□□□ 0.86
CTSA-206ENST00000480961 GALNT3Q14435 633 aa20.45■□□□□ 0.86
CTSA-206ENST00000480961 SIX1Q15475 284 aaPredicted RBP20.45■□□□□ 0.86
CTSA-206ENST00000480961 LONRF2Q1L5Z9 754 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms