RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 PCDH19Q8TAB3 1148 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 CXorf40AQ8TE69 158 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 PTCD2Q8WV60 388 aaKnown RBP13.41□□□□□ -0.26
PTPN7-212ENST00000480836 BTN2A2Q8WVV5 523 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 OR1E3Q8WZA6 343 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 CCDC74AQ96AQ1 378 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 LGR4Q9BXB1 951 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 EDEM3Q9BZQ6 932 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 FOXP3Q9BZS1 431 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 DACH1Q9UI36 760 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 DAAM1Q9Y4D1 1078 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 CFAP46Q8IYW2 2715 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 TEX33O43247 280 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 ATMINO43313 823 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-212ENST00000480836 PRAMEF11O60813 436 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 IGSF6O95976 241 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 ATP1A3P13637 1013 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 PAPOLAP51003 745 aaKnown RBP13.4□□□□□ -0.26
PTPN7-212ENST00000480836 VAC14Q08AM6 782 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 PTK2BQ14289 1009 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 AFMIDQ63HM1 303 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 E4F1Q66K89 784 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-212ENST00000480836 ACAD10Q6JQN1 1059 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 SDR16C5Q8N3Y7 309 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 PDXPQ96GD0 296 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 SLC13A1Q9BZW2 595 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 ATXN7L1Q9ULK2 861 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-212ENST00000480836 PCDHGA8Q9Y5G5 932 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 ST14Q9Y5Y6 855 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 ANKRD36A6QL64 1941 aa13.4□□□□□ -0.26
PTPN7-212ENST00000480836 KALRNO60229 2985 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 A0A0U1RQS6 177 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 ZSCAN5CA6NGD5 496 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-212ENST00000480836 LGALS16A8MUM7 142 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 ERVH48-1M5A8F1 160 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 CALB1P05937 261 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 TCF4P15884 667 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 MMP12P39900 470 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 PEX5P50542 639 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 TMPRSS3P57727 454 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 SRP54P61011 504 aaKnown RBP13.39□□□□□ -0.27
PTPN7-212ENST00000480836 MAMLD1Q13495 774 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 NFATC4Q14934 902 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 AGERQ15109 404 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 PARP15Q460N3 678 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 EFHC2Q5JST6 749 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 DNAJC24Q6P3W2 148 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 LIPIQ6XZB0 460 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 CLEC17AQ6ZS10 378 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 CLEC14AQ86T13 490 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 ZNF605Q86T29 641 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 SRLQ86TD4 932 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 ZSCAN30Q86W11 494 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 GPR156Q8NFN8 814 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 WDR36Q8NI36 951 aaKnown RBP13.39□□□□□ -0.27
PTPN7-212ENST00000480836 CASKIN2Q8WXE0 1202 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 ARHGEF26Q96DR7 871 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 TBATAQ96M53 351 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 ERGIC2Q96RQ1 377 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 KCTD15Q96SI1 283 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-212ENST00000480836 CNPY3Q9BT09 278 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 DPH1Q9BZG8 443 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 FGF22Q9HCT0 170 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 THSD1Q9NS62 852 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 SEPT11Q9NVA2 429 aaKnown RBP13.39□□□□□ -0.27
PTPN7-212ENST00000480836 UBA2Q9UBT2 640 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-212ENST00000480836 PCSK1NQ9UHG2 260 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 ATMQ13315 3056 aa13.39□□□□□ -0.27
PTPN7-212ENST00000480836 ZNF462Q96JM2 2506 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 TMCO5BA8MYB1 307 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 K7ENP7 123 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 TRAFD1O14545 582 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-212ENST00000480836 TCEA3O75764 348 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 RECQL5O94762 991 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-212ENST00000480836 PCCBP05166 539 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 WT1P19544 449 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-212ENST00000480836 RBMS1P29558 406 aaKnown RBP13.38□□□□□ -0.27
PTPN7-212ENST00000480836 ETV5P41161 510 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 UBXN1Q04323 297 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 RAD51Q06609 339 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 TAF1BQ53T94 588 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-212ENST00000480836 FKBP15Q5T1M5 1219 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 INO80CQ6PI98 192 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-212ENST00000480836 OGFOD3Q6PK18 319 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 ARL10Q8N8L6 244 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 EXD3Q8N9H8 876 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 NEK11Q8NG66 645 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 TPCN2Q8NHX9 752 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 HCAR2Q8TDS4 363 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 ECHDC3Q96DC8 303 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 SMIM14Q96QK8 99 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 RBM15Q96T37 977 aaKnown RBP eCLIP13.38□□□□□ -0.273e-6■■■■□ 20.8
PTPN7-212ENST00000480836 SNRNP25Q9BV90 132 aaKnown RBP13.38□□□□□ -0.27
PTPN7-212ENST00000480836 TMEM168Q9H0V1 697 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 SYNDIG1Q9H7V2 258 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 GPR34Q9UPC5 381 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 ATP8A1Q9Y2Q0 1164 aa13.38□□□□□ -0.27
PTPN7-212ENST00000480836 CCDC187A0A096LP49 1063 aa13.37□□□□□ -0.27
PTPN7-212ENST00000480836 B4GAT1O43505 415 aa13.37□□□□□ -0.27
PTPN7-212ENST00000480836 PEX11BO96011 259 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms