RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 KIFC1Q9BW19 673 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 PLAC1Q9HBJ0 212 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 PRSS16Q9NQE7 514 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 SOX13Q9UN79 622 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 RPL26L1Q9UNX3 145 aaKnown RBP17.69■□□□□ 0.42
UPF3A-206ENST00000480362 PLAAQ9Y263 795 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 FAM237BA0A1B0GVD1 139 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 A0A1W2PQ67 120 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 MAN2B1O00754 1011 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 MAP2K7O14733 419 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 SASH3O75995 380 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 GSTA2P09210 222 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 CHRM1P11229 460 aaPredicted RBP17.68■□□□□ 0.42
UPF3A-206ENST00000480362 BMP1P13497 986 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 CD72P21854 359 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 PHBP35232 272 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 ABL2P42684 1182 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 GRIA4P48058 902 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 ALS2CLQ60I27 953 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 ZSWIM9Q86XI8 627 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 KCNV2Q8TDN2 545 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 OR8D1Q8WZ84 308 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 FAM129BQ96TA1 746 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 OSBPL1AQ9BXW6 950 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 VIPAS39Q9H9C1 493 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 CA14Q9ULX7 337 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 PHTF1Q9UMS5 762 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 TCAF1Q9Y4C2 921 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 SPO11Q9Y5K1 396 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 RPS6KL1Q9Y6S9 549 aa17.68■□□□□ 0.42
UPF3A-206ENST00000480362 A0A087WUV0 522 aaPredicted RBP17.67■□□□□ 0.42
UPF3A-206ENST00000480362 CCDC78A2IDD5 438 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 HEATR9A2RTY3 570 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 ATP8B1O43520 1251 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 SPAG6O75602 509 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 PRNPP04156 253 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 POLBP06746 335 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 ABHD2P08910 425 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 CTPS1P17812 591 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 NMBRP28336 390 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 NTSR1P30989 418 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 MRPS21P82921 87 aaKnown RBP17.67■□□□□ 0.42
UPF3A-206ENST00000480362 ELAVL3Q14576 367 aaKnown RBP17.67■□□□□ 0.42
UPF3A-206ENST00000480362 PTPRRQ15256 657 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 ANKRD20A4Q4UJ75 823 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 SPANXN3Q5MJ09 141 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 STEAP4Q687X5 459 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 SDE2Q6IQ49 451 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 TMEM135Q86UB9 458 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 TMIEQ8NEW7 156 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 OR2W6PQ8NHA6 318 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 GSDMBQ8TAX9 411 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 BRSK1Q8TDC3 778 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 PTCD2Q8WV60 388 aaKnown RBP17.67■□□□□ 0.42
UPF3A-206ENST00000480362 ZNF669Q96BR6 464 aaPredicted RBP17.67■□□□□ 0.42
UPF3A-206ENST00000480362 ERLEC1Q96DZ1 483 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 ZNF778Q96MU6 729 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 FCRL3Q96P31 734 aaPredicted RBP17.67■□□□□ 0.42
UPF3A-206ENST00000480362 ZIM3Q96PE6 472 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 MRM3Q9HC36 420 aaKnown RBP17.67■□□□□ 0.42
UPF3A-206ENST00000480362 SARDHQ9UL12 918 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 PPM1HQ9ULR3 514 aa17.67■□□□□ 0.42
UPF3A-206ENST00000480362 SPTBN5Q9NRC6 3674 aaKnown RBP17.67■□□□□ 0.42
UPF3A-206ENST00000480362 A0A0J9YYE9 177 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 USP1O94782 785 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 TRBC1P01850 177 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 SHBGP04278 402 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 ALPIP09923 528 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 NUDT17P0C025 328 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 POLR2LP62875 67 aaKnown RBP17.66■□□□□ 0.42
UPF3A-206ENST00000480362 CRYMQ14894 314 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 FBXO43Q4G163 708 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 ZNF805Q5CZA5 627 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 TSTD2Q5T7W7 516 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 ARMC3Q5W041 872 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 BRAT1Q6PJG6 821 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 ZNF852Q6ZMS4 543 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 NDUFAF2Q8N183 169 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 IL17RCQ8NAC3 791 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 MDGA1Q8NFP4 955 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 PIP4K2CQ8TBX8 421 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 FBF1Q8TES7 1133 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 ATXN2LQ8WWM7 1075 aaKnown RBP17.66■□□□□ 0.42
UPF3A-206ENST00000480362 ZBTB9Q96C00 473 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 MFSD3Q96ES6 412 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.66■□□□□ 0.42
UPF3A-206ENST00000480362 RABGEF1Q9UJ41 708 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 NDRG2Q9UN36 371 aaKnown RBP17.66■□□□□ 0.42
UPF3A-206ENST00000480362 PPIL1Q9Y3C6 166 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 KCTD3Q9Y597 815 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 NFS1Q9Y697 457 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 FAM169AQ9Y6X4 670 aa17.66■□□□□ 0.42
UPF3A-206ENST00000480362 MYLKQ15746 1914 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 TCRBV9S1A1TA0A576 114 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 TSPAN11A1L157 253 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 MROH6A6NGR9 719 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 KPNA3O00505 521 aaPredicted RBP17.65■□□□□ 0.42
UPF3A-206ENST00000480362 LDB2O43679 373 aa17.65■□□□□ 0.42
UPF3A-206ENST00000480362 KLF8O95600 359 aaPredicted RBP17.65■□□□□ 0.42
UPF3A-206ENST00000480362 CRTAMO95727 393 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms