RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 OR6P1Q8NGX9 317 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 PDCD6IPQ8WUM4 868 aaKnown RBP17.23■□□□□ 0.35
PKD1-213ENST00000480227 ANKRD49Q8WVL7 239 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 FBXO32Q969P5 355 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 PHF21BQ96EK2 531 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 FUBP3Q96I24 572 aaKnown RBP eCLIP17.23■□□□□ 0.35
PKD1-213ENST00000480227 C8orf48Q96LL4 319 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 CCDC28BQ9BUN5 200 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 CRISPLD1Q9H336 500 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 TNFRSF12AQ9NP84 129 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 HCSTQ9UBK5 93 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 PCDHB5Q9Y5E4 795 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 TLL2Q9Y6L7 1015 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 NPHS1O60500 1241 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 SLC2A3P11169 496 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 XRCC1P18887 633 aaPredicted RBP17.22■□□□□ 0.35
PKD1-213ENST00000480227 ACVRL1P37023 503 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 ACLYP53396 1101 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 FLOT2Q14254 428 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 GRAMD1BQ3KR37 738 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 SIRPB2Q5JXA9 342 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 C10orf120Q5SQS8 335 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 RASIP1Q5U651 963 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 FAM171A1Q5VUB5 890 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 PIWIL4Q7Z3Z4 852 aaKnown RBP17.22■□□□□ 0.35
PKD1-213ENST00000480227 NPAS2Q99743 824 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 VCX3BQ9H321 246 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 WDR41Q9HAD4 459 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 MARCH4Q9P2E8 410 aaPredicted RBP17.22■□□□□ 0.35
PKD1-213ENST00000480227 PRPF19Q9UMS4 504 aaKnown RBP17.22■□□□□ 0.35
PKD1-213ENST00000480227 ANKRD12Q6UB98 2062 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 SDHDO14521 159 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 EOMESO95936 686 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 DPP6P42658 865 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 LEPRP48357 1165 aaKnown RBP17.22■□□□□ 0.35
PKD1-213ENST00000480227 TAF10Q12962 218 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 CEACAM7Q14002 265 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 PTPRCAPQ14761 206 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 TECRLQ5HYJ1 363 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 FOXB2Q5VYV0 432 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 CILP2Q8IUL8 1156 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 PCSK9Q8NBP7 692 aaKnown RBP17.22■□□□□ 0.35
PKD1-213ENST00000480227 TET1Q8NFU7 2136 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 HDAC10Q969S8 669 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 TMA16Q96EY4 203 aaKnown RBP17.22■□□□□ 0.35
PKD1-213ENST00000480227 RPRD1AQ96P16 312 aaPredicted RBP17.22■□□□□ 0.35
PKD1-213ENST00000480227 FAM193BQ96PV7 902 aaPredicted RBP17.22■□□□□ 0.35
PKD1-213ENST00000480227 GPR62Q9BZJ7 368 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 PIDD1Q9HB75 910 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 MARCH2Q9P0N8 246 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 THSD7BQ9C0I4 1608 aa17.22■□□□□ 0.35
PKD1-213ENST00000480227 TCN1P20061 433 aaPredicted RBP17.21■□□□□ 0.35
PKD1-213ENST00000480227 YWHAQP27348 245 aa17.21■□□□□ 0.35
PKD1-213ENST00000480227 CST5P28325 142 aaPredicted RBP17.21■□□□□ 0.35
PKD1-213ENST00000480227 KPNA2P52292 529 aaKnown RBP17.21■□□□□ 0.35
PKD1-213ENST00000480227 MRPS22P82650 360 aaKnown RBP17.21■□□□□ 0.35
PKD1-213ENST00000480227 SULT2A1Q06520 285 aa17.21■□□□□ 0.35
PKD1-213ENST00000480227 ZNF423Q2M1K9 1284 aa17.21■□□□□ 0.35
PKD1-213ENST00000480227 PIGGQ5H8A4 983 aa17.21■□□□□ 0.35
PKD1-213ENST00000480227 KIAA0408Q6ZU52 694 aa17.21■□□□□ 0.35
PKD1-213ENST00000480227 PIM3Q86V86 326 aa17.21■□□□□ 0.35
PKD1-213ENST00000480227 ARRDC2Q8TBH0 407 aa17.21■□□□□ 0.35
PKD1-213ENST00000480227 IFT43Q96FT9 208 aa17.21■□□□□ 0.35
PKD1-213ENST00000480227 BTN2A3PQ96KV6 586 aa17.21■□□□□ 0.35
PKD1-213ENST00000480227 EFCAB1Q9HAE3 211 aa17.21■□□□□ 0.35
PKD1-213ENST00000480227 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.21■□□□□ 0.35
PKD1-213ENST00000480227 RNF186Q9NXI6 227 aa17.21■□□□□ 0.35
PKD1-213ENST00000480227 ASB3Q9Y575 518 aa17.21■□□□□ 0.35
PKD1-213ENST00000480227 IGLV3-10A0A075B6K4 115 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 SLC12A8A0AV02 714 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 TRPC5OSA6NMA1 111 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 A8MT66 165 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 GATMP50440 423 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 CDKN2DP55273 166 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 MS4A2Q01362 244 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 POLD3Q15054 466 aaPredicted RBP17.21■□□□□ 0.34
PKD1-213ENST00000480227 HECTD2Q5U5R9 776 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 AGAP9Q5VTM2 703 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 TMEM207Q6UWW9 146 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 SETD3Q86TU7 594 aaPredicted RBP17.21■□□□□ 0.34
PKD1-213ENST00000480227 ATP6V0D2Q8N8Y2 350 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 CEP70Q8NHQ1 597 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 CALML6Q8TD86 181 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 TSC22D3Q99576 134 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 SEPT5Q99719 369 aaPredicted RBP17.21■□□□□ 0.34
PKD1-213ENST00000480227 VPS45Q9NRW7 570 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 FNIP2Q9P278 1114 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 CRYL1Q9Y2S2 319 aa17.21■□□□□ 0.34
PKD1-213ENST00000480227 TMEM189-UBE2V1I3L0A0 370 aa17.2■□□□□ 0.34
PKD1-213ENST00000480227 TXNDC9O14530 226 aa17.2■□□□□ 0.34
PKD1-213ENST00000480227 MUSKO15146 869 aa17.2■□□□□ 0.34
PKD1-213ENST00000480227 SLC22A2O15244 555 aa17.2■□□□□ 0.34
PKD1-213ENST00000480227 IPO13O94829 963 aaKnown RBP17.2■□□□□ 0.34
PKD1-213ENST00000480227 LTA4HP09960 611 aaKnown RBP17.2■□□□□ 0.34
PKD1-213ENST00000480227 ATXN1LP0C7T5 689 aaKnown RBP17.2■□□□□ 0.34
PKD1-213ENST00000480227 TSPAN8P19075 237 aa17.2■□□□□ 0.34
PKD1-213ENST00000480227 MED21Q13503 144 aa17.2■□□□□ 0.34
PKD1-213ENST00000480227 MGAT5BQ3V5L5 792 aa17.2■□□□□ 0.34
PKD1-213ENST00000480227 MMEL1Q495T6 779 aa17.2■□□□□ 0.34
PKD1-213ENST00000480227 RSPO2Q6UXX9 243 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms