RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 TRIM16O95361 564 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 C6P13671 934 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 GARSP41250 739 aaKnown RBP18.9■□□□□ 0.62
SREBF1-212ENST00000478616 SSR1P43307 286 aaKnown RBP18.9■□□□□ 0.62
SREBF1-212ENST00000478616 ACADVLP49748 655 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 AGERQ15109 404 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 IRF4Q15306 451 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 HADHQ16836 314 aaKnown RBP18.9■□□□□ 0.62
SREBF1-212ENST00000478616 BRAT1Q6PJG6 821 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 ZSCAN30Q86W11 494 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 ATPAF2Q8N5M1 289 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 NUDCD1Q96RS6 583 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 GOLPH3Q9H4A6 298 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 ATP13A3Q9H7F0 1226 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 ZNHIT6Q9NWK9 470 aaKnown RBP18.9■□□□□ 0.62
SREBF1-212ENST00000478616 SALL4Q9UJQ4 1053 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 PCDHGC4Q9Y5F7 938 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 FREM2Q5SZK8 3169 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 DMXL2Q8TDJ6 3036 aa18.9■□□□□ 0.62
SREBF1-212ENST00000478616 RP1P56715 2156 aa18.89■□□□□ 0.62
SREBF1-212ENST00000478616 RCCD1A6NED2 376 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 GOLGA8CPA6NN73 597 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 NEMP1O14524 444 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 ENC1O14682 589 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 TM7SF2O76062 418 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 LIG3P49916 1009 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 SUOXP51687 545 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 AP1S1P61966 158 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 GRM3Q14832 879 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 PDK2Q15119 407 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 ALG1LQ6GMV1 187 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 UNQ6494/PRO21346Q6UXR6 183 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 CCNI2Q6ZMN8 369 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-212ENST00000478616 TMPRSS7Q7RTY8 843 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 CBARPQ8N350 705 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-212ENST00000478616 IFT43Q96FT9 208 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 CNDP2Q96KP4 475 aaKnown RBP18.89■□□□□ 0.61
SREBF1-212ENST00000478616 TSGA13Q96PP4 275 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 RNF157Q96PX1 679 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 DTLQ9NZJ0 730 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 FTSJ1Q9UET6 329 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 INTUQ9ULD6 942 aa18.89■□□□□ 0.61
SREBF1-212ENST00000478616 REXO2Q9Y3B8 237 aaKnown RBP18.89■□□□□ 0.61
SREBF1-212ENST00000478616 A0A0U1RQS6 177 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 FPGTO14772 594 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 SIGLEC6O43699 453 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 FZD6O60353 706 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 CSF2P04141 144 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 MYF5P13349 255 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 NME1P15531 152 aaKnown RBP18.88■□□□□ 0.61
SREBF1-212ENST00000478616 SERPINA4P29622 427 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 SERPINB6P35237 376 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 RABIFP47224 123 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 SGCGQ13326 291 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 PDE1CQ14123 709 aaPredicted RBP18.88■□□□□ 0.61
SREBF1-212ENST00000478616 LIPIQ6XZB0 460 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 DPPA4Q7L190 304 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 RBFAQ8N0V3 343 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 KCTD6Q8NC69 237 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 PLA2G15Q8NCC3 412 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 ARRDC2Q8TBH0 407 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 FAM174AQ8TBP5 190 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 CXorf40AQ8TE69 158 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 MRFAP1L1Q96HT8 127 aa18.88■□□□□ 0.61
SREBF1-212ENST00000478616 APOBEC2Q9Y235 224 aaKnown RBP18.88■□□□□ 0.61
SREBF1-212ENST00000478616 ZFHX4Q86UP3 3567 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 LAMA5O15230 3695 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 NEBLO76041 1014 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 LDOC1O95751 146 aaPredicted RBP18.87■□□□□ 0.61
SREBF1-212ENST00000478616 PROS1P07225 676 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 PDHA1P08559 390 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 KRT7P08729 469 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 LHCGRP22888 699 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 ARHGAP25P42331 645 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 MMP13P45452 471 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 RENBPP51606 427 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 HADHBP55084 474 aaKnown RBP18.87■□□□□ 0.61
SREBF1-212ENST00000478616 BCL2L1Q07817 233 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 NIPAL4Q0D2K0 466 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 ELP6Q0PNE2 266 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 CAMK2BQ13554 666 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 ZNF235Q14590 738 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 SMAD1Q15797 465 aaKnown RBP18.87■□□□□ 0.61
SREBF1-212ENST00000478616 TAZQ16635 292 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 SLC9A4Q6AI14 798 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 DHRS13Q6UX07 377 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 RHOT2Q8IXI1 618 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 OR4C6Q8NH72 309 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 PIH1D2Q8WWB5 315 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 FATE1Q969F0 183 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 NT5MQ9NPB1 228 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 CELSR3Q9NYQ7 3312 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 B4GALT6Q9UBX8 382 aa18.87■□□□□ 0.61
SREBF1-212ENST00000478616 APC2O95996 2303 aa18.86■□□□□ 0.61
SREBF1-212ENST00000478616 A8MX80 341 aa18.86■□□□□ 0.61
SREBF1-212ENST00000478616 TAF4O00268 1085 aa18.86■□□□□ 0.61
SREBF1-212ENST00000478616 GCATO75600 419 aa18.86■□□□□ 0.61
SREBF1-212ENST00000478616 PRLP01236 227 aa18.86■□□□□ 0.61
SREBF1-212ENST00000478616 HLA-DQB2P05538 268 aa18.86■□□□□ 0.61
SREBF1-212ENST00000478616 CELA2BP08218 269 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms