RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ITPKBP27987 946 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 MMP12P39900 470 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 ARL4AP40617 200 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 HCAR3P49019 387 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 PAPOLAP51003 745 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 HK3P52790 923 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 TMPRSS3P57727 454 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 IL10RBQ08334 325 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 KLHL30Q0D2K2 578 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 CCDC173Q0VFZ6 552 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 SPIDRQ14159 915 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 CYTH1Q15438 398 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 ANO6Q4KMQ2 910 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 PPP6R3Q5H9R7 873 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 APTXQ7Z2E3 356 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 IRF2BP2Q7Z5L9 587 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 SRLQ86TD4 932 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 RBFAQ8N0V3 343 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 ARL14Q8N4G2 192 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 NSMCE1Q8WV22 266 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 KCNE4Q8WWG9 221 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 ZNF653Q96CK0 615 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 CELF6Q96J87 481 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 ZNF599Q96NL3 588 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 SNRNP25Q9BV90 132 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 EDEM3Q9BZQ6 932 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 KLC2Q9H0B6 622 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 PRORYQ9H606 182 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 RTN4Q9NQC3 1192 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 CNOT8Q9UFF9 292 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 SEPT3Q9UH03 358 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 KLF15Q9UIH9 416 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 PADI4Q9UM07 663 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 U3KQA8 63 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 KNTC1P50748 2209 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 WDFY3Q8IZQ1 3526 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 TMEM191CA6NGB0 347 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 CAPN8A6NHC0 703 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 PDE2AO00408 941 aaPredicted RBP14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 KRT10P13645 584 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 TSHRP16473 764 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 SERPINB6P35237 376 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 LIG3P49916 1009 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 TLE3Q04726 772 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 NSUN2Q08J23 767 aaKnown RBP eCLIP14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 ZNF235Q14590 738 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 C3orf38Q5JPI3 329 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 TPRG1LQ5T0D9 272 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 HID1Q8IV36 788 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 SPACA3Q8IXA5 215 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 SLC35F3Q8IY50 421 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 WDR92Q96MX6 357 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 SYT11Q9BT88 431 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 DPH1Q9BZG8 443 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 STRADBQ9C0K7 418 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 SYNDIG1Q9H7V2 258 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 MBNL1Q9NR56 388 aaKnown RBP14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 HAUS2Q9NVX0 235 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 GPATCH2LQ9NWQ4 482 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 AIPL1Q9NZN9 384 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 PCSK1NQ9UHG2 260 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 PCDHGA8Q9Y5G5 932 aa14.55□□□□□ -0.08
SMARCE1-209ENST00000478349 J3KR12 359 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 ATXN7O15265 892 aaPredicted RBP14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 YY2O15391 372 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 INSIG1O15503 277 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 ATMINO43313 823 aaPredicted RBP14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 GCATO75600 419 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 SERPINC1P01008 464 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 TNFP01375 233 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 FTLP02792 175 aaPredicted RBP14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 PCCBP05166 539 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 ERCC2P18074 760 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 TGM2P21980 687 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 MIPP30301 263 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 PCK1P35558 622 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 PRKCIP41743 596 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 KIAA1024LP59773 190 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 SRP54P61011 504 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 OGDHQ02218 1023 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 EIF3IQ13347 325 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 C1orf61Q13536 156 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 INPP5AQ14642 412 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 TSR1Q2NL82 804 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 WSCD2Q2TBF2 565 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 TMCO3Q6UWJ1 677 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 ENPP7Q6UWV6 458 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 CAMK1DQ8IU85 385 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 WDR36Q8NI36 951 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 IQCDQ96DY2 449 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 HIC2Q96JB3 615 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 CCDC3Q9BQI4 270 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 APOOQ9BUR5 198 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 SLC39A8Q9C0K1 460 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 HSD3B7Q9H2F3 369 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 HAUS4Q9H6D7 363 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 TAS2R14Q9NYV8 317 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 GPR34Q9UPC5 381 aa14.54□□□□□ -0.08
SMARCE1-209ENST00000478349 BZW2Q9Y6E2 419 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms