RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 NAF1Q96HR8 494 aaKnown RBP13.11□□□□□ -0.31
ABCF3-212ENST00000478288 NCAPGQ9BPX3 1015 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 WRAP53Q9BUR4 548 aaKnown RBP13.11□□□□□ -0.31
ABCF3-212ENST00000478288 EDEM3Q9BZQ6 932 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 KLC2Q9H0B6 622 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 SUV39H2Q9H5I1 410 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 UBA2Q9UBT2 640 aaPredicted RBP13.11□□□□□ -0.31
ABCF3-212ENST00000478288 PADI4Q9UM07 663 aa13.11□□□□□ -0.31
ABCF3-212ENST00000478288 NAV2Q8IVL1 2488 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 LGALS16A8MUM7 142 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 RASGRP1O95267 797 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 C6P13671 934 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 PLA2G2AP14555 144 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 XPAP23025 273 aaPredicted RBP13.1□□□□□ -0.31
ABCF3-212ENST00000478288 MMP12P39900 470 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 CSNK1DP48730 415 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 COPB1P53618 953 aaKnown RBP13.1□□□□□ -0.31
ABCF3-212ENST00000478288 C1orf61Q13536 156 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 CYTH1Q15438 398 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 ZNF605Q86T29 641 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 GKN2Q86XP6 184 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 ANKRD20A12PQ8NF67 263 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 NEK11Q8NG66 645 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 TTC9Q92623 222 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 MCEEQ96PE7 176 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 ERGIC2Q96RQ1 377 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 CPNE5Q9HCH3 593 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 PCDH12Q9NPG4 1184 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 LIMA1Q9UHB6 759 aaKnown RBP13.1□□□□□ -0.31
ABCF3-212ENST00000478288 ACSL6Q9UKU0 697 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 ATP8A1Q9Y2Q0 1164 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 PCDHGA7Q9Y5G6 932 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 DGKBQ9Y6T7 804 aa13.1□□□□□ -0.31
ABCF3-212ENST00000478288 LRRC10BA6NIK2 292 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 K7ENP7 123 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 INSIG1O15503 277 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 CREB3O43889 395 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 PRAMEF11O60813 436 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 CCDC172P0C7W6 258 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 TPI1P60174 286 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 RPL7AP62424 266 aaKnown RBP13.09□□□□□ -0.31
ABCF3-212ENST00000478288 MTM1Q13496 603 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 ALG11Q2TAA5 492 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 TAF1BQ53T94 588 aaPredicted RBP13.09□□□□□ -0.31
ABCF3-212ENST00000478288 ARHGAP40Q5TG30 622 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 SCYL2Q6P3W7 929 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 INO80CQ6PI98 192 aaPredicted RBP13.09□□□□□ -0.31
ABCF3-212ENST00000478288 KYQ8NBH2 561 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 PCDH19Q8TAB3 1148 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 SPOCK2Q92563 424 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 ECHDC3Q96DC8 303 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 EXOC2Q96KP1 924 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 RBM15Q96T37 977 aaKnown RBP eCLIP13.09□□□□□ -0.31
ABCF3-212ENST00000478288 AGPAT1Q99943 283 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 APOOQ9BUR5 198 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 ATP13A3Q9H7F0 1226 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 FANCLQ9NW38 375 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 DOLKQ9UPQ8 538 aa13.09□□□□□ -0.31
ABCF3-212ENST00000478288 PTPN13Q12923 2485 aa13.08□□□□□ -0.31
ABCF3-212ENST00000478288 ARHGAP42A6NI28 874 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 D6RAR5 112 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 TNFSF15O95150 251 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 PIGNO95427 931 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 CELA2BP08218 269 aaPredicted RBP13.08□□□□□ -0.32
ABCF3-212ENST00000478288 HOXC4P09017 264 aaPredicted RBP13.08□□□□□ -0.32
ABCF3-212ENST00000478288 CTSEP14091 401 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 PNLIPP16233 465 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 ITIH2P19823 946 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 SERPINA4P29622 427 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 CCKBRP32239 447 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 LIG3P49916 1009 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 KIAA1024LP59773 190 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 SRP54P61011 504 aaKnown RBP13.08□□□□□ -0.32
ABCF3-212ENST00000478288 INPP5AQ14642 412 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 CFAP58Q5T655 872 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 ACAD10Q6JQN1 1059 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 DCUN1D2Q6PH85 259 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 CRTC1Q6UUV9 634 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 HID1Q8IV36 788 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 PSTKQ8IV42 348 aaKnown RBP13.08□□□□□ -0.32
ABCF3-212ENST00000478288 WDR92Q96MX6 357 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 GFM1Q96RP9 751 aaKnown RBP13.08□□□□□ -0.32
ABCF3-212ENST00000478288 STRADBQ9C0K7 418 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 KLQ9UEF7 1012 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 APPL1Q9UKG1 709 aa13.08□□□□□ -0.32
ABCF3-212ENST00000478288 TNFRSF10CO14798 259 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 PLD2O14939 933 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 FERP16591 822 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 KELP23276 732 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 ZNF135P52742 658 aaPredicted RBP13.07□□□□□ -0.32
ABCF3-212ENST00000478288 POLR2LP62875 67 aaKnown RBP13.07□□□□□ -0.32
ABCF3-212ENST00000478288 MYL5Q02045 173 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 NSUN2Q08J23 767 aaKnown RBP eCLIP13.07□□□□□ -0.32
ABCF3-212ENST00000478288 CLN3Q13286 438 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 RFTN1Q14699 578 aaPredicted RBP13.07□□□□□ -0.32
ABCF3-212ENST00000478288 AFMIDQ63HM1 303 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 ENPP7Q6UWV6 458 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 ZSWIM9Q86XI8 627 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 MCOLN2Q8IZK6 566 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 GPR156Q8NFN8 814 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 347.1 ms