RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 RD3Q7Z3Z2 195 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 NOP9Q86U38 636 aaKnown RBP9.74□□□□□ -0.85
CCM2-210ENST00000478169 FAM72BQ86X60 149 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 ZNF677Q86XU0 584 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 ZNF354CQ86Y25 554 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 CCNJLQ8IV13 435 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 FAM114A1Q8IWE2 563 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 RXFP2Q8WXD0 754 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 CPA5Q8WXQ8 436 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 CENPIQ92674 756 aaPredicted RBP9.74□□□□□ -0.85
CCM2-210ENST00000478169 EXTL1Q92935 676 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 NTAN1Q96AB6 310 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 WDR92Q96MX6 357 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 RBM15Q96T37 977 aaKnown RBP eCLIP9.74□□□□□ -0.85
CCM2-210ENST00000478169 CMKLR1Q99788 373 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 NAA15Q9BXJ9 866 aaKnown RBP9.74□□□□□ -0.85
CCM2-210ENST00000478169 RAB6CQ9H0N0 254 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 METTL5Q9NRN9 209 aaKnown RBP9.74□□□□□ -0.85
CCM2-210ENST00000478169 KLQ9UEF7 1012 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 PISDQ9UG56 409 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 PCDHB11Q9Y5F2 797 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 FHOD1Q9Y613 1164 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 DGKBQ9Y6T7 804 aa9.74□□□□□ -0.85
CCM2-210ENST00000478169 ZFC3H1O60293 1989 aaKnown RBP9.74□□□□□ -0.85
CCM2-210ENST00000478169 A0A1W2PQC6 194 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 TSPAN11A1L157 253 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 C2CD4BA6NLJ0 364 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 MMP8P22894 467 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 YBEYP58557 167 aaPredicted RBP9.73□□□□□ -0.85
CCM2-210ENST00000478169 MTM1Q13496 603 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 UGP2Q16851 508 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 MIIPQ5JXC2 388 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 CERCAMQ5T4B2 595 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 NAA35Q5VZE5 725 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 ERAP2Q6P179 960 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 BRAT1Q6PJG6 821 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 DNAAF5Q86Y56 855 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 RTL3Q8N8U3 475 aaKnown RBP9.73□□□□□ -0.85
CCM2-210ENST00000478169 MLKLQ8NB16 471 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 EPS8L1Q8TE68 723 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 HMCESQ96FZ2 354 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 ZNF641Q96N77 438 aaPredicted RBP9.73□□□□□ -0.85
CCM2-210ENST00000478169 NCAPGQ9BPX3 1015 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 TUBGCP2Q9BSJ2 902 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 STK33Q9BYT3 514 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 SUV39H2Q9H5I1 410 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 NOL6Q9H6R4 1146 aaKnown RBP9.73□□□□□ -0.85
CCM2-210ENST00000478169 COQ6Q9Y2Z9 468 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 DAAM1Q9Y4D1 1078 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 PCDHGA4Q9Y5G9 962 aa9.73□□□□□ -0.85
CCM2-210ENST00000478169 NBASA2RRP1 2371 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 PRAMEF33A0A0G2JMD5 474 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 FAM170AA1A519 330 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 CFAP69A5D8W1 941 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.72□□□□□ -0.85
CCM2-210ENST00000478169 F8VZ95 297 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 TNFRSF10CO14798 259 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 NUDT21O43809 227 aaKnown RBP9.72□□□□□ -0.85
CCM2-210ENST00000478169 PRAMEF10O60809 474 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 GADD45BO75293 160 aaPredicted RBP9.72□□□□□ -0.85
CCM2-210ENST00000478169 CYP1A1P04798 512 aaPredicted RBP9.72□□□□□ -0.85
CCM2-210ENST00000478169 HOXC4P09017 264 aaPredicted RBP9.72□□□□□ -0.85
CCM2-210ENST00000478169 FAM87AP0C7U9 286 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 UCHL3P15374 230 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 ITIH1P19827 911 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 KELP23276 732 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 LIG3P49916 1009 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 HDAC4P56524 1084 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 KIAA1024LP59773 190 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 SRSF6Q13247 344 aaKnown RBP9.72□□□□□ -0.85
CCM2-210ENST00000478169 SERINC3Q13530 473 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 BECN1Q14457 450 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 TCEA2Q15560 299 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 TBR1Q16650 682 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 PARP15Q460N3 678 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 TMEM164Q5U3C3 297 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 SPRED1Q7Z699 444 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 TAF8Q7Z7C8 310 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 SLFN11Q7Z7L1 901 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 DTX1Q86Y01 620 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 CCDC185Q8N715 623 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 Q8N9G6 341 aaPredicted RBP9.72□□□□□ -0.85
CCM2-210ENST00000478169 OR56A4Q8NGH8 313 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 GPT2Q8TD30 523 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 FAM172AQ8WUF8 416 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 USP7Q93009 1102 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 TUBGCP5Q96RT8 1024 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 MAGEB5Q9BZ81 275 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 TRIM4Q9C037 500 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 PCDH12Q9NPG4 1184 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 LRIT1Q9P2V4 623 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 LHX3Q9UBR4 397 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 OR1A2Q9Y585 309 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 RNF215Q9Y6U7 377 aa9.72□□□□□ -0.85
CCM2-210ENST00000478169 COL12A1Q99715 3063 aa9.71□□□□□ -0.85
CCM2-210ENST00000478169 WASH4PA8MWX3 477 aa9.71□□□□□ -0.86
CCM2-210ENST00000478169 C9orf172C9J069 976 aa9.71□□□□□ -0.86
CCM2-210ENST00000478169 RASA4BC9J798 803 aa9.71□□□□□ -0.86
CCM2-210ENST00000478169 CACNB4O00305 520 aaPredicted RBP9.71□□□□□ -0.86
CCM2-210ENST00000478169 INSIG1O15503 277 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms