RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 SYT11Q9BT88 431 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 APOOQ9BUR5 198 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 EDEM3Q9BZQ6 932 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 HSD3B7Q9H2F3 369 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 UBA2Q9UBT2 640 aaPredicted RBP16.85■□□□□ 0.29
TRIM13-208ENST00000478111 TMEM110-MUSTN1A8MSY1 372 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 FGF10O15520 208 aaPredicted RBP16.84■□□□□ 0.29
TRIM13-208ENST00000478111 LIG3P49916 1009 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 BLKP51451 505 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 NDST2P52849 883 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 RHDQ02161 417 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 CFHR1Q03591 330 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 UBXN1Q04323 297 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 INPP5AQ14642 412 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 NFATC4Q14934 902 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 ELOCQ15369 112 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 CA9Q16790 459 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 ACAD10Q6JQN1 1059 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 ESRP1Q6NXG1 681 aaKnown RBP16.84■□□□□ 0.29
TRIM13-208ENST00000478111 LVRNQ6Q4G3 990 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 IRF2BP2Q7Z5L9 587 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 CLEC14AQ86T13 490 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 CAMK1DQ8IU85 385 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 ARFGAP1Q8N6T3 406 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 WDR36Q8NI36 951 aaKnown RBP16.84■□□□□ 0.29
TRIM13-208ENST00000478111 PCDH19Q8TAB3 1148 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 WBP1Q96G27 269 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 CELF6Q96J87 481 aaKnown RBP16.84■□□□□ 0.29
TRIM13-208ENST00000478111 PCMTD1Q96MG8 357 aaPredicted RBP16.84■□□□□ 0.29
TRIM13-208ENST00000478111 ZNF641Q96N77 438 aaPredicted RBP16.84■□□□□ 0.29
TRIM13-208ENST00000478111 SLC39A8Q9C0K1 460 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 SEPT11Q9NVA2 429 aaKnown RBP16.84■□□□□ 0.29
TRIM13-208ENST00000478111 GPATCH2LQ9NWQ4 482 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 TAS2R14Q9NYV8 317 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 GULP1Q9UBP9 304 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 OR1A2Q9Y585 309 aa16.84■□□□□ 0.29
TRIM13-208ENST00000478111 PRKCGP05129 697 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 PLA2G2AP14555 144 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 XPAP23025 273 aaPredicted RBP16.83■□□□□ 0.28
TRIM13-208ENST00000478111 HTR7P34969 479 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 MMP12P39900 470 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 CSNK1DP48730 415 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 PAPOLAP51003 745 aaKnown RBP16.83■□□□□ 0.28
TRIM13-208ENST00000478111 SRP54P61011 504 aaKnown RBP16.83■□□□□ 0.28
TRIM13-208ENST00000478111 GRM3Q14832 879 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 NCAPHQ15003 741 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 AFMIDQ63HM1 303 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 ENPP7Q6UWV6 458 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 B3GNT8Q7Z7M8 397 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 MYO18BQ8IUG5 2567 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 ARL10Q8N8L6 244 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 KYQ8NBH2 561 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 PLA2G15Q8NCC3 412 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 TTC9Q92623 222 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 NSMCE3Q96MG7 304 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 NCAPGQ9BPX3 1015 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.83■□□□□ 0.28
TRIM13-208ENST00000478111 SEMA4CQ9C0C4 833 aa16.83■□□□□ 0.28
TRIM13-208ENST00000478111 CCDC187A0A096LP49 1063 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 A0A1W2PQM1 296 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 ANKRD62A6NC57 917 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 TNFSF15O95150 251 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 RASGRP1O95267 797 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 ALPIP09923 528 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 CTSEP14091 401 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 GM2AP17900 193 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 MLLT3P42568 568 aaPredicted RBP16.82■□□□□ 0.28
TRIM13-208ENST00000478111 TPI1P60174 286 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 MYL5Q02045 173 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 VAC14Q08AM6 782 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 RALGDSQ12967 914 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 SPIDRQ14159 915 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 TCEA2Q15560 299 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 DCUN1D2Q6PH85 259 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 FOXR1Q6PIV2 292 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 BRAT1Q6PJG6 821 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 RD3Q7Z3Z2 195 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 SRLQ86TD4 932 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 ARHGAP12Q8IWW6 846 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 SDR16C5Q8N3Y7 309 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 TSEN2Q8NCE0 465 aaKnown RBP16.82■□□□□ 0.28
TRIM13-208ENST00000478111 FUBP1Q96AE4 644 aaKnown RBP16.82■□□□□ 0.28
TRIM13-208ENST00000478111 CCDC74AQ96AQ1 378 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 ECHDC3Q96DC8 303 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 TUBGCP5Q96RT8 1024 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 SIRPGQ9P1W8 387 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 AP4E1Q9UPM8 1137 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 ATP8A1Q9Y2Q0 1164 aa16.82■□□□□ 0.28
TRIM13-208ENST00000478111 BSNQ9UPA5 3926 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 CFAP69A5D8W1 941 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 FERP16591 822 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 HTR1BP28222 390 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 CCL7P80098 99 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 CLN3Q13286 438 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 MAMLD1Q13495 774 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 MTM1Q13496 603 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 TAF1BQ53T94 588 aaPredicted RBP16.81■□□□□ 0.28
TRIM13-208ENST00000478111 PLEKHA7Q6IQ23 1121 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 ERAP2Q6P179 960 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 CYP4V2Q6ZWL3 525 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms