RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 ARID1BQ8NFD5 2236 aaPredicted RBP17.8■□□□□ 0.44
PTPN7-209ENST00000477554 RNF25Q96BH1 459 aaPredicted RBP17.8■□□□□ 0.44
PTPN7-209ENST00000477554 ZNF670Q9BS34 389 aa17.8■□□□□ 0.44
PTPN7-209ENST00000477554 SLC32A1Q9H598 525 aa17.8■□□□□ 0.44
PTPN7-209ENST00000477554 GDF3Q9NR23 364 aa17.8■□□□□ 0.44
PTPN7-209ENST00000477554 UCKL1Q9NWZ5 548 aa17.8■□□□□ 0.44
PTPN7-209ENST00000477554 RCOR3Q9P2K3 495 aaPredicted RBP17.8■□□□□ 0.44
PTPN7-209ENST00000477554 AMFRQ9UKV5 643 aa17.8■□□□□ 0.44
PTPN7-209ENST00000477554 CHD8Q9HCK8 2581 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 LRRD1A4D1F6 860 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 TSPAN6O43657 245 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 SPOPO43791 374 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 HYAL3O43820 417 aaPredicted RBP17.79■□□□□ 0.44
PTPN7-209ENST00000477554 EPHA8P29322 1005 aaPredicted RBP17.79■□□□□ 0.44
PTPN7-209ENST00000477554 IGFALSP35858 605 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 GARSP41250 739 aaKnown RBP17.79■□□□□ 0.44
PTPN7-209ENST00000477554 CSNK1DP48730 415 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 ETF1P62495 437 aaKnown RBP17.79■□□□□ 0.44
PTPN7-209ENST00000477554 RAD51Q06609 339 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 TRAF2Q12933 501 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 RALGDSQ12967 914 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 ZFYVE27Q5T4F4 411 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 KCTD16Q68DU8 428 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 MFSD7Q6UXD7 560 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 PEX26Q7Z412 305 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 PTAR1Q7Z6K3 402 aaPredicted RBP17.79■□□□□ 0.44
PTPN7-209ENST00000477554 PELI3Q8N2H9 469 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 SLC35F6Q8N357 371 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 RHBDD1Q8TEB9 315 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 CENPTQ96BT3 561 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 ECHDC3Q96DC8 303 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 KLHDC7BQ96G42 594 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 C16orf45Q96MC5 204 aaPredicted RBP17.79■□□□□ 0.44
PTPN7-209ENST00000477554 CNTNAP3BQ96NU0 1288 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 RNF157Q96PX1 679 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 MGME1Q9BQP7 344 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 CNTNAP3Q9BZ76 1288 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 NT5MQ9NPB1 228 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 GPR27Q9NS67 375 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 DONSONQ9NYP3 566 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 DTLQ9NZJ0 730 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 SEPT3Q9UH03 358 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 JRKLQ9Y4A0 524 aa17.79■□□□□ 0.44
PTPN7-209ENST00000477554 RIOK3O14730 519 aaKnown RBP17.78■□□□□ 0.44
PTPN7-209ENST00000477554 PCDHGA12O60330 932 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 KRT1P04264 644 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 KRT7P08729 469 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 AKT2P31751 481 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 MMP12P39900 470 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 CLDN6P56747 220 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 ZNF235Q14590 738 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 RFTN1Q14699 578 aaPredicted RBP17.78■□□□□ 0.44
PTPN7-209ENST00000477554 PDK2Q15119 407 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 CHCHD4Q8N4Q1 142 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 TP53I13Q8NBR0 393 aaPredicted RBP17.78■□□□□ 0.44
PTPN7-209ENST00000477554 RAB7BQ96AH8 199 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 ZNF599Q96NL3 588 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 LGMNQ99538 433 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 CEP41Q9BYV8 373 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 SAE1Q9UBE0 346 aaPredicted RBP17.78■□□□□ 0.44
PTPN7-209ENST00000477554 PCDHGB2Q9Y5G2 931 aa17.78■□□□□ 0.44
PTPN7-209ENST00000477554 FTH1P19P0C7X4 201 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 MYF5P13349 255 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 KRT10P13645 584 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 C6P13671 934 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 MMP13P45452 471 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 DYNLT1P63172 113 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 NSUN2Q08J23 767 aaKnown RBP eCLIP17.77■□□□□ 0.44
PTPN7-209ENST00000477554 CCDC15Q0P6D6 951 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 DNAJC3Q13217 504 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 FZD2Q14332 565 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 TMEM52BQ4KMG9 183 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 NT5DC3Q86UY8 548 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 IQCHQ86VS3 1027 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 SLC25A45Q8N413 288 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 TEX26Q8N6G2 289 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 EID2Q8N6I1 236 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 KRT35Q92764 455 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 ZNF641Q96N77 438 aaPredicted RBP17.77■□□□□ 0.44
PTPN7-209ENST00000477554 TUBGCP5Q96RT8 1024 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 TCEAL2Q9H3H9 227 aaPredicted RBP17.77■□□□□ 0.44
PTPN7-209ENST00000477554 ATP13A3Q9H7F0 1226 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 KLK13Q9UKR3 277 aa17.77■□□□□ 0.44
PTPN7-209ENST00000477554 CEP295Q9C0D2 2601 aa17.77■□□□□ 0.43
PTPN7-209ENST00000477554 FREM2Q5SZK8 3169 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 MIF4GDA9UHW6 222 aaKnown RBP17.76■□□□□ 0.43
PTPN7-209ENST00000477554 FLRT2O43155 660 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 FTCDO95954 541 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 HLA-DQB2P05538 268 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 PDHA1P08559 390 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 GIMD1P0DJR0 217 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 SERPINB6P35237 376 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 LIG3P49916 1009 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 DSC2Q02487 901 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 BCL2L1Q07817 233 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 NIPAL4Q0D2K0 466 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 ZBTB17Q13105 803 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 IRF4Q15306 451 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 WSCD2Q2TBF2 565 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 MEI1Q5TIA1 1274 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms