RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ANAPC5Q9UJX4 755 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 SCML1Q9UN30 329 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 RPL26L1Q9UNX3 145 aaKnown RBP16.3■□□□□ 0.2
VHL-203ENST00000477538 SHOC2Q9UQ13 582 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 SMAPO00193 183 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 PLK4O00444 970 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 APBB3O95704 486 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 FGF1P05230 155 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 ATXN1LP0C7T5 689 aaKnown RBP16.29■□□□□ 0.2
VHL-203ENST00000477538 DRD3P35462 400 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 GRIA4P48058 902 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 NEK3P51956 506 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 POLR2LP62875 67 aaKnown RBP16.29■□□□□ 0.2
VHL-203ENST00000477538 SARNPP82979 210 aaKnown RBP16.29■□□□□ 0.2
VHL-203ENST00000477538 TTC31Q49AM3 519 aaPredicted RBP16.29■□□□□ 0.2
VHL-203ENST00000477538 SIRPB2Q5JXA9 342 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 ANO7Q6IWH7 933 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 MAMSTRQ6ZN01 415 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 AADATQ8N5Z0 425 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 TMEM105Q8N8V8 129 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 MCUQ8NE86 351 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 OR52K1Q8NGK4 314 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 PIH1D2Q8WWB5 315 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 SPOCK2Q92563 424 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 UBXN4Q92575 508 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 HDAC8Q9BY41 377 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.29■□□□□ 0.2
VHL-203ENST00000477538 PHTF1Q9UMS5 762 aa16.29■□□□□ 0.2
VHL-203ENST00000477538 V9GYY5 206 aaPredicted RBP16.29■□□□□ 0.2
VHL-203ENST00000477538 A0A1W2PP55 124 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 UPK3BL1B0FP48 263 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 ANKRD66B4E2M5 251 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 UPK3BL2E5RIL1 263 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 GOLGA8MH3BSY2 632 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 PAPSS2O95340 614 aaPredicted RBP16.28■□□□□ 0.2
VHL-203ENST00000477538 ACADMP11310 421 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 TIMP2P16035 220 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 XPAP23025 273 aaPredicted RBP16.28■□□□□ 0.2
VHL-203ENST00000477538 GRIA1P42261 906 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 CNTN1Q12860 1018 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 TRADDQ15628 312 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 QPCTQ16769 361 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 UGP2Q16851 508 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 LRRC73Q5JTD7 316 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 DENND5AQ6IQ26 1287 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 FBXL19Q6PCT2 694 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 ZNF534Q76KX8 674 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 ERN2Q76MJ5 926 aaKnown RBP16.28■□□□□ 0.2
VHL-203ENST00000477538 NDUFAF2Q8N183 169 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 HDDC3Q8N4P3 179 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 CAMKK1Q8N5S9 505 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 DNAAF3Q8N9W5 541 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 MDGA1Q8NFP4 955 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 GANCQ8TET4 914 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 OMDQ99983 421 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 ARNT2Q9HBZ2 717 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 CASS4Q9NQ75 786 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 FBXL12Q9NXK8 326 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 SERGEFQ9UGK8 458 aa16.28■□□□□ 0.2
VHL-203ENST00000477538 ABCA7Q8IZY2 2146 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 A0A0J9YYE9 177 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 TP73O15350 636 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 RNASEH2AO75792 299 aaKnown RBP16.27■□□□□ 0.2
VHL-203ENST00000477538 TRBC1P01850 177 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 PRKCGP05129 697 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 ADRB3P13945 408 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 CTPS1P17812 591 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 NFKBIAP25963 317 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 P2RY2P41231 377 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 ABL2P42684 1182 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 PLTPP55058 493 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 CAV1Q03135 178 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 CCDC15Q0P6D6 951 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 CDH17Q12864 832 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 SFSWAPQ12872 951 aaKnown RBP16.27■□□□□ 0.2
VHL-203ENST00000477538 PIP5KL1Q5T9C9 394 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 LRRC8BQ6P9F7 803 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 USP30Q70CQ3 517 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 USP45Q70EL2 814 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 TTC7BQ86TV6 843 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 KBTBD6Q86V97 674 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 RASSF3Q86WH2 238 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 IFT20Q8IY31 132 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 ART4Q93070 314 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 SERPINB12Q96P63 405 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 ANKZF1Q9H8Y5 726 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 XAB2Q9HCS7 855 aaKnown RBP16.27■□□□□ 0.2
VHL-203ENST00000477538 GDF3Q9NR23 364 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 PIH1D1Q9NWS0 290 aaKnown RBP16.27■□□□□ 0.2
VHL-203ENST00000477538 PPIL1Q9Y3C6 166 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 FANCMQ8IYD8 2048 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 ZNF318Q5VUA4 2279 aa16.27■□□□□ 0.2
VHL-203ENST00000477538 PLXNB3Q9ULL4 1909 aa16.26■□□□□ 0.19
VHL-203ENST00000477538 CAPN8A6NHC0 703 aa16.26■□□□□ 0.19
VHL-203ENST00000477538 K7ESF4 209 aa16.26■□□□□ 0.19
VHL-203ENST00000477538 AP3B1O00203 1094 aa16.26■□□□□ 0.19
VHL-203ENST00000477538 ALPIP09923 528 aa16.26■□□□□ 0.19
VHL-203ENST00000477538 MLNP12872 115 aa16.26■□□□□ 0.19
VHL-203ENST00000477538 SUOXP51687 545 aa16.26■□□□□ 0.19
VHL-203ENST00000477538 ERCC6LQ2NKX8 1250 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms