RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 SYT11Q9BT88 431 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 DPH1Q9BZG8 443 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 EDEM3Q9BZQ6 932 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 HSD3B7Q9H2F3 369 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 TAS2R14Q9NYV8 317 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 PADI4Q9UM07 663 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 AP4E1Q9UPM8 1137 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 DOLKQ9UPQ8 538 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 ATP8A1Q9Y2Q0 1164 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 HELZ2Q9BYK8 2649 aaKnown RBP11.45□□□□□ -0.58
HDLBP-236ENST00000477477 PMS2P1A4D2B8 440 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 ARHGAP42A6NI28 874 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 EIF3CLB5ME19 914 aaKnown RBP11.45□□□□□ -0.58
HDLBP-236ENST00000477477 ERVH48-1M5A8F1 160 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 EEF2KO00418 725 aaKnown RBP11.45□□□□□ -0.58
HDLBP-236ENST00000477477 NTN3O00634 580 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-236ENST00000477477 CASC3O15234 703 aaKnown RBP11.45□□□□□ -0.58
HDLBP-236ENST00000477477 BUB1BO60566 1050 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-236ENST00000477477 PRKCGP05129 697 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 PCCBP05166 539 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 ALPIP09923 528 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 CDK11BP21127 795 aaKnown RBP11.45□□□□□ -0.58
HDLBP-236ENST00000477477 PSMA2P25787 234 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 HTR1BP28222 390 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 RGRP47804 291 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 CSNK1DP48730 415 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 LIG3P49916 1009 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 PAPOLAP51003 745 aaKnown RBP11.45□□□□□ -0.58
HDLBP-236ENST00000477477 MAMLD1Q13495 774 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 SPIDRQ14159 915 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 INPP5AQ14642 412 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 CA9Q16790 459 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 PPP1R2P3Q6NXS1 205 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 LVRNQ6Q4G3 990 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 ENPP7Q6UWV6 458 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 IRF2BP2Q7Z5L9 587 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 CAMK1DQ8IU85 385 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 HID1Q8IV36 788 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 SDR16C5Q8N3Y7 309 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 KYQ8NBH2 561 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 SCG3Q8WXD2 468 aaKnown RBP11.45□□□□□ -0.58
HDLBP-236ENST00000477477 EIF3CQ99613 913 aaKnown RBP11.45□□□□□ -0.58
HDLBP-236ENST00000477477 APOOQ9BUR5 198 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 SLC39A8Q9C0K1 460 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 DHX35Q9H5Z1 703 aaKnown RBP11.45□□□□□ -0.58
HDLBP-236ENST00000477477 SYNDIG1Q9H7V2 258 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 CPNE5Q9HCH3 593 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 PARVAQ9NVD7 372 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 GULP1Q9UBP9 304 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 KLQ9UEF7 1012 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 SSUH2Q9Y2M2 353 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 OR1A2Q9Y585 309 aa11.45□□□□□ -0.58
HDLBP-236ENST00000477477 CFAP46Q8IYW2 2715 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 CCDC187A0A096LP49 1063 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 CFAP69A5D8W1 941 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 CDRT15L2A8MXV6 281 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 ATMINO43313 823 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-236ENST00000477477 CTSEP14091 401 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 TNFAIP3P21580 790 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 SERPINA4P29622 427 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 MLLT3P42568 568 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-236ENST00000477477 SRP54P61011 504 aaKnown RBP11.44□□□□□ -0.58
HDLBP-236ENST00000477477 RHDQ02161 417 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 RALGDSQ12967 914 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 MTM1Q13496 603 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 TCEA2Q15560 299 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 ARHGAP40Q5TG30 622 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 AFMIDQ63HM1 303 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 PLEKHA7Q6IQ23 1121 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 RFX8Q6ZV50 586 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 NYAP1Q6ZVC0 841 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 RD3Q7Z3Z2 195 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 CLEC14AQ86T13 490 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 SRLQ86TD4 932 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 GKN2Q86XP6 184 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 ARHGAP12Q8IWW6 846 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 ZNF843Q8N446 348 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 ARFGAP1Q8N6T3 406 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 NPWQ8N729 165 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 TSEN2Q8NCE0 465 aaKnown RBP11.44□□□□□ -0.58
HDLBP-236ENST00000477477 ATL2Q8NHH9 583 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 WDR36Q8NI36 951 aaKnown RBP11.44□□□□□ -0.58
HDLBP-236ENST00000477477 CCDC74AQ96AQ1 378 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 ECHDC3Q96DC8 303 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 PDXPQ96GD0 296 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 WDR92Q96MX6 357 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 PEBP4Q96S96 227 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 KCTD15Q96SI1 283 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-236ENST00000477477 SNRNP25Q9BV90 132 aaKnown RBP11.44□□□□□ -0.58
HDLBP-236ENST00000477477 ATP13A3Q9H7F0 1226 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 SP110Q9HB58 689 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 SIRPGQ9P1W8 387 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 RABGEF1Q9UJ41 708 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 MYO6Q9UM54 1294 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 GPR34Q9UPC5 381 aa11.44□□□□□ -0.58
HDLBP-236ENST00000477477 ATMQ13315 3056 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 TMCO5BA8MYB1 307 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 DAPK3O43293 454 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 PALMO75781 387 aa11.43□□□□□ -0.58
HDLBP-236ENST00000477477 RECQL5O94762 991 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms