RNA–Protein interactions for RNA: ENST00000477002.1

CNTNAP3-209, Transcript of contactin associated protein like 3, human

TSL 5

Gene CNTNAP3, Length 291 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP3-209	ENST00000477002	TSPY26P	Q9H489	355 aa		18.21	■□□□□ 0.51
CNTNAP3-209	ENST00000477002	CAAP1	Q9H8G2	361 aa		18.21	■□□□□ 0.51
CNTNAP3-209	ENST00000477002	USP29	Q9HBJ7	922 aa		18.21	■□□□□ 0.51
CNTNAP3-209	ENST00000477002	EVA1B	Q9NVM1	165 aa		18.21	■□□□□ 0.51
CNTNAP3-209	ENST00000477002	ZNHIT6	Q9NWK9	470 aa	Known RBP	18.21	■□□□□ 0.51
CNTNAP3-209	ENST00000477002	CTTNBP2NL	Q9P2B4	639 aa		18.21	■□□□□ 0.51
CNTNAP3-209	ENST00000477002	UVRAG	Q9P2Y5	699 aa		18.21	■□□□□ 0.51
CNTNAP3-209	ENST00000477002	LCMT1	Q9UIC8	334 aa		18.21	■□□□□ 0.51
CNTNAP3-209	ENST00000477002	KLF15	Q9UIH9	416 aa		18.21	■□□□□ 0.51
CNTNAP3-209	ENST00000477002	DMXL2	Q8TDJ6	3036 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	ANKRD11	Q6UB99	2663 aa	Predicted RBP	18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	ZZEF1	O43149	2961 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	MYLK	Q15746	1914 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	TMEM110-MUSTN1	A8MSY1	372 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002		K7ESM1	405 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	AQP9	O43315	295 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	MAFK	O60675	156 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	PEX11B	O96011	259 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	TPM1	P09493	284 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	H2AFZ	P0C0S5	128 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	PEX5	P50542	639 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	IRF4	Q15306	451 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	TSR1	Q2NL82	804 aa	Known RBP	18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	MACC1	Q6ZN28	852 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	H2AFV	Q71UI9	128 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	LRRC49	Q8IUZ0	686 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	CACTIN-AS1	Q8N1I8	211 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	ATPAF2	Q8N5M1	289 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	FAM71B	Q8TC56	605 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	NSMCE1	Q8WV22	266 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	RFFL	Q8WZ73	363 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	APOLD1	Q96LR9	279 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	TBATA	Q96M53	351 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	DEF6	Q9H4E7	631 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	SPAST	Q9UBP0	616 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	COQ6	Q9Y2Z9	468 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	SHROOM3	Q8TF72	1996 aa		18.2	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	FREM2	Q5SZK8	3169 aa		18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	SSU72P8	A0A1W2PR75	194 aa		18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	TRAFD1	O14545	582 aa	Predicted RBP	18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	LZTS3	O60299	673 aa	Predicted RBP	18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	NEBL	O76041	1014 aa		18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	PROSC	O94903	275 aa		18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	IL4R	P24394	825 aa		18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	DUSP3	P51452	185 aa	Predicted RBP	18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	TARDBP	Q13148	414 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	ASTE1	Q2TB18	679 aa	Predicted RBP	18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	WSCD2	Q2TBF2	565 aa		18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	ZCCHC8	Q6NZY4	707 aa	Known RBP	18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	VSTM4	Q8IW00	320 aa		18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	LMX1A	Q8TE12	382 aa		18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	SPOCK2	Q92563	424 aa		18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	NUDCD1	Q96RS6	583 aa		18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	SLC13A1	Q9BZW2	595 aa		18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	NCKIPSD	Q9NZQ3	722 aa		18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	CHD6	Q8TD26	2715 aa		18.19	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	PKD1L2	Q7Z442	2459 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002		A0A1W2PQ67	120 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	TPP1	O14773	563 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	SOCS5	O75159	536 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	PRKCG	P05129	697 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	GP1BA	P07359	652 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	HTR1B	P28222	390 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	ARSE	P51690	589 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	CLDN6	P56747	220 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	INSM1	Q01101	510 aa	Predicted RBP	18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	SEMG2	Q02383	582 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	PPARD	Q03181	441 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	CYP4F3	Q08477	520 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	INPP5A	Q14642	412 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	RALGPS1	Q5JS13	557 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	FAXC	Q5TGI0	409 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	MARC1	Q5VT66	337 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	PHACTR4	Q8IZ21	702 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	KCTD6	Q8NC69	237 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	IL12RB2	Q99665	862 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	PACSIN1	Q9BY11	444 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	SCUBE2	Q9NQ36	999 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	ABHD10	Q9NUJ1	306 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	APOBEC3B	Q9UH17	382 aa	Known RBP	18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	SALL4	Q9UJQ4	1053 aa		18.18	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	ACACA	Q13085	2346 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	LY6G6E	A0A0G2JKS1	128 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	HTRA2	O43464	458 aa	Predicted RBP	18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	AKR1B10	O60218	316 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	KRT7	P08729	469 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	CD48	P09326	243 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	TMEM253	P0C7T8	217 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	ELFN1	P0C7U0	828 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	CR2	P20023	1033 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	MMP13	P45452	471 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	BLK	P51451	505 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	RALGDS	Q12967	914 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	MMRN1	Q13201	1228 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	MTM1	Q13496	603 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	DPYSL3	Q14195	570 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	PDK2	Q15119	407 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	PRRT3	Q5FWE3	981 aa		18.17	■□□□□ 0.5
CNTNAP3-209	ENST00000477002	LIPI	Q6XZB0	460 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms