RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 LINC00205P59089 165 aa5.12□□□□□ -1.59
PTCD3-211ENST00000476215 RPS3AP61247 264 aaKnown RBP5.12□□□□□ -1.59
PTCD3-211ENST00000476215 HNF4GQ14541 408 aa5.12□□□□□ -1.59
PTCD3-211ENST00000476215 TCTN1Q2MV58 587 aa5.12□□□□□ -1.59
PTCD3-211ENST00000476215 ZNF549Q6P9A3 640 aa5.12□□□□□ -1.59
PTCD3-211ENST00000476215 C1orf122Q6ZSJ8 110 aa5.12□□□□□ -1.59
PTCD3-211ENST00000476215 SFTPA2Q8IWL1 248 aa5.12□□□□□ -1.59
PTCD3-211ENST00000476215 CCDC105Q8IYK2 499 aa5.12□□□□□ -1.59
PTCD3-211ENST00000476215 ADAMTS15Q8TE58 950 aa5.12□□□□□ -1.59
PTCD3-211ENST00000476215 SNAPC3Q92966 411 aa5.12□□□□□ -1.59
PTCD3-211ENST00000476215 FBXL8Q96CD0 374 aa5.12□□□□□ -1.59
PTCD3-211ENST00000476215 SF3B5Q9BWJ5 86 aaKnown RBP5.12□□□□□ -1.59
PTCD3-211ENST00000476215 HIF1ANQ9NWT6 349 aa5.12□□□□□ -1.59
PTCD3-211ENST00000476215 INTS6Q9UL03 887 aaKnown RBP5.12□□□□□ -1.59
PTCD3-211ENST00000476215 MKLN1Q9UL63 735 aa5.12□□□□□ -1.59
PTCD3-211ENST00000476215 LSM4Q9Y4Z0 139 aaKnown RBP5.12□□□□□ -1.59
PTCD3-211ENST00000476215 OR6C75A6NL08 312 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 EIF3CLB5ME19 914 aaKnown RBP5.11□□□□□ -1.59
PTCD3-211ENST00000476215 INAFM1C9JVW0 142 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 USP17L23D6RBM5 183 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 ASAP2O43150 1006 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 SEC14L5O43304 696 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 KLK8O60259 260 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 BAIAP3O94812 1187 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 OAZ2O95190 189 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 PGGT1BP53609 377 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 TMEM115Q12893 351 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-211ENST00000476215 SIM2Q14190 667 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-211ENST00000476215 RALBP1Q15311 655 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 LCTLQ6UWM7 567 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 BHLHA9Q7RTU4 235 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 ARRDC2Q8TBH0 407 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 NSMCE1Q8WV22 266 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 OIT3Q8WWZ8 545 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 GTF3C6Q969F1 213 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 SMARCE1Q969G3 411 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 PLEKHA4Q9H4M7 779 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 MRPL44Q9H9J2 332 aaKnown RBP5.11□□□□□ -1.59
PTCD3-211ENST00000476215 CLK4Q9HAZ1 481 aaKnown RBP5.11□□□□□ -1.59
PTCD3-211ENST00000476215 MAGEE1Q9HCI5 957 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 KRT84Q9NSB2 600 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 CISD1Q9NZ45 108 aaKnown RBP5.11□□□□□ -1.59
PTCD3-211ENST00000476215 IL36RNQ9UBH0 155 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 CAPN7Q9Y6W3 813 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 PIAS3Q9Y6X2 628 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 ITIH6Q6UXX5 1313 aa5.11□□□□□ -1.59
PTCD3-211ENST00000476215 TAF4O00268 1085 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 USO1O60763 962 aaKnown RBP5.1□□□□□ -1.59
PTCD3-211ENST00000476215 ITGAXP20702 1163 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 CAPN3P20807 821 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 AGAP20933 346 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 BSGP35613 385 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 RXRGP48443 463 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 POLGP54098 1239 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-211ENST00000476215 OLR1P78380 273 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 ADORA2A-AS1P86434 159 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 ST3GAL1Q11201 340 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 CTTNQ14247 550 aaKnown RBP5.1□□□□□ -1.59
PTCD3-211ENST00000476215 CCNG2Q16589 344 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 FBXO46Q6PJ61 603 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-211ENST00000476215 GSTA5Q7RTV2 222 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 SAMD14Q8IZD0 417 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-211ENST00000476215 PELI3Q8N2H9 469 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 PRR26Q8N8Z3 221 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 ANKRD52Q8NB46 1076 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 TDRD9Q8NDG6 1382 aaKnown RBP5.1□□□□□ -1.59
PTCD3-211ENST00000476215 TRIB2Q92519 343 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 ERGIC1Q969X5 290 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 INTS12Q96CB8 462 aaKnown RBP5.1□□□□□ -1.59
PTCD3-211ENST00000476215 ZNF570Q96NI8 536 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 DCLK3Q9C098 648 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 SLC6A13Q9NSD5 602 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 DIAPH3Q9NSV4 1193 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 PLK2Q9NYY3 685 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 LIMA1Q9UHB6 759 aaKnown RBP5.1□□□□□ -1.59
PTCD3-211ENST00000476215 HAO1Q9UJM8 370 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 AAR2Q9Y312 384 aaKnown RBP5.1□□□□□ -1.59
PTCD3-211ENST00000476215 PSAT1Q9Y617 370 aa5.1□□□□□ -1.59
PTCD3-211ENST00000476215 PGPEP1LA6NFU8 196 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 F5H0A9 414 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-211ENST00000476215 SOX30O94993 753 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 NDUFB4O95168 129 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 CCNDBP1O95273 360 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 PSMA4P25789 261 aaKnown RBP5.09□□□□□ -1.59
PTCD3-211ENST00000476215 NFKBIAP25963 317 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 HOXD3P31249 432 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-211ENST00000476215 CDAP32320 146 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 SHMT1P34896 483 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 PIGAP37287 484 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 PBX3P40426 434 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 NUDT6P53370 316 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 KRTAP10-9P60411 292 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 DCAF7P61962 342 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 ABATP80404 500 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 LMOD3Q0VAK6 560 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 ERV3-1Q14264 604 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 FRG1Q14331 258 aaKnown RBP5.09□□□□□ -1.59
PTCD3-211ENST00000476215 FGFBP1Q14512 234 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 MAPRE1Q15691 268 aaKnown RBP5.09□□□□□ -1.59
PTCD3-211ENST00000476215 ALG11Q2TAA5 492 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms