RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 HPS6Q86YV9 775 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 CILP2Q8IUL8 1156 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 DEFB107AQ8IZN7 70 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 TXNDC5Q8NBS9 432 aaKnown RBP16.75■□□□□ 0.27
TVP23B-202ENST00000476139 RDH11Q8TC12 318 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 ANKRD49Q8WVL7 239 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 SPATA17Q96L03 361 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 FAM96AQ9H5X1 160 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 IGSF5Q9NSI5 407 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 PLXNA3P51805 1871 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 MROH6A6NGR9 719 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 LDB2O43679 373 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 KIF1CO43896 1103 aaKnown RBP16.74■□□□□ 0.27
TVP23B-202ENST00000476139 HNRNPLP14866 589 aaKnown RBP eCLIP16.74■□□□□ 0.27
TVP23B-202ENST00000476139 TACR2P21452 398 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 CCL23P55773 120 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 IL10RBQ08334 325 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 TRMT5Q32P41 509 aaKnown RBP16.74■□□□□ 0.27
TVP23B-202ENST00000476139 LSM12Q3MHD2 195 aaKnown RBP16.74■□□□□ 0.27
TVP23B-202ENST00000476139 TMEM198Q66K66 360 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 PHC3Q8NDX5 983 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 FBXO22Q8NEZ5 403 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 BLOC1S5Q8TDH9 187 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 TBATAQ96M53 351 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 LENG8Q96PV6 779 aaPredicted RBP16.74■□□□□ 0.27
TVP23B-202ENST00000476139 GPBP1L1Q9HC44 474 aaPredicted RBP16.74■□□□□ 0.27
TVP23B-202ENST00000476139 CYP4F12Q9HCS2 524 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 LRCH1Q9Y2L9 728 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 LOC285095A0A1B0GVY8 99 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 HDAC3O15379 428 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 PQBP1O60828 265 aaKnown RBP16.74■□□□□ 0.27
TVP23B-202ENST00000476139 ZDHHC11BP0C7U3 371 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 GLDCP23378 1020 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 MSX2P35548 267 aaPredicted RBP16.74■□□□□ 0.27
TVP23B-202ENST00000476139 LEPRP48357 1165 aaKnown RBP16.74■□□□□ 0.27
TVP23B-202ENST00000476139 PLK1P53350 603 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 RPS24P62847 133 aaKnown RBP16.74■□□□□ 0.27
TVP23B-202ENST00000476139 POU4F1Q01851 419 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 SEL1L3Q68CR1 1132 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 MYLK4Q86YV6 388 aaPredicted RBP16.74■□□□□ 0.27
TVP23B-202ENST00000476139 OR7D4Q8NG98 312 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 ZNF184Q99676 751 aaPredicted RBP16.74■□□□□ 0.27
TVP23B-202ENST00000476139 MRPL46Q9H2W6 279 aaKnown RBP16.74■□□□□ 0.27
TVP23B-202ENST00000476139 NDE1Q9NXR1 346 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 PHF24Q9UPV7 400 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 KIF3CO14782 793 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 CCDC166P0CW27 439 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 MYL4P12829 197 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 OR1D2P34982 312 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 LPCAT4Q643R3 524 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 TMEM207Q6UWW9 146 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 TADA1Q96BN2 335 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 NSMCE3Q96MG7 304 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 GKN1Q9NS71 199 aa16.74■□□□□ 0.27
TVP23B-202ENST00000476139 H2AFYO75367 372 aaKnown RBP16.73■□□□□ 0.27
TVP23B-202ENST00000476139 CDKN2DP55273 166 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 AP2B1P63010 937 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 PRAMEP78395 509 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 RING1Q06587 406 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 KLF10Q13118 480 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 PDCD2Q16342 344 aaPredicted RBP16.73■□□□□ 0.27
TVP23B-202ENST00000476139 PARP15Q460N3 678 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 PPM1LQ5SGD2 360 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 NPAS4Q8IUM7 802 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 FATE1Q969F0 183 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 CMTM5Q96DZ9 223 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 MARK4Q96L34 752 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 ZNF512Q96ME7 567 aaPredicted RBP16.73■□□□□ 0.27
TVP23B-202ENST00000476139 POMKQ9H5K3 350 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 GPAMQ9HCL2 828 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 MID2Q9UJV3 735 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 ANGPTL2Q9UKU9 493 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 ZFP37Q9Y6Q3 630 aaPredicted RBP16.73■□□□□ 0.27
TVP23B-202ENST00000476139 PRAMEF11O60813 436 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 MRPS35P82673 323 aaKnown RBP16.73■□□□□ 0.27
TVP23B-202ENST00000476139 RNF111Q6ZNA4 994 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 ANKS3Q6ZW76 656 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 PIM3Q86V86 326 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 DENND1CQ8IV53 801 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 SEPT8Q92599 483 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 EXOC2Q96KP1 924 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 NACA2Q9H009 215 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 PIDD1Q9HB75 910 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 FIS1Q9Y3D6 152 aa16.73■□□□□ 0.27
TVP23B-202ENST00000476139 FNDC1Q4ZHG4 1894 aaPredicted RBP16.73■□□□□ 0.27
TVP23B-202ENST00000476139 F8W8V4 182 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 S1PR4O95977 384 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 SP100P23497 879 aaPredicted RBP16.72■□□□□ 0.27
TVP23B-202ENST00000476139 KCNC1P48547 511 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 POLD2P49005 469 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 ATXN3P54252 364 aaPredicted RBP16.72■□□□□ 0.27
TVP23B-202ENST00000476139 BFSP2Q13515 415 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 HECTD2Q5U5R9 776 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 IL31Q6EBC2 164 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 TRIM67Q6ZTA4 783 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 KIAA0408Q6ZU52 694 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 DEFB128Q7Z7B8 93 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 OR13C4Q8NGS5 318 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 PHF21BQ96EK2 531 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 SMIM14Q96QK8 99 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms