RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 RNGTTO60942 597 aaKnown RBP15.24■□□□□ 0.03
SNX13-207ENST00000475800 STK10O94804 968 aaKnown RBP15.24■□□□□ 0.03
SNX13-207ENST00000475800 IGHV4-34P06331 123 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 RBP3P10745 1247 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 TIMP2P16035 220 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 SPINK2P20155 84 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 PTPN3P26045 913 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 ABL2P42684 1182 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 RPS21P63220 83 aaKnown RBP15.24■□□□□ 0.03
SNX13-207ENST00000475800 IRX4P78413 519 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 SETMARQ53H47 684 aaPredicted RBP15.24■□□□□ 0.03
SNX13-207ENST00000475800 ZNF569Q5MCW4 686 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 ARMC12Q5T9G4 340 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 SLC13A5Q86YT5 568 aaPredicted RBP15.24■□□□□ 0.03
SNX13-207ENST00000475800 NDUFAF2Q8N183 169 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 LRRN4Q8WUT4 740 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 TEKT5Q96M29 485 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 FSCN3Q9NQT6 498 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 EIF2B4Q9UI10 523 aaKnown RBP15.24■□□□□ 0.03
SNX13-207ENST00000475800 TRHDEQ9UKU6 1024 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 PLXNA2O75051 1894 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 LRRK1Q38SD2 2015 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 CFAP69A5D8W1 941 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 BCAT2O15382 392 aaPredicted RBP15.23■□□□□ 0.03
SNX13-207ENST00000475800 CPP00450 1065 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 PMLP29590 882 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 RPL26P61254 145 aaKnown RBP15.23■□□□□ 0.03
SNX13-207ENST00000475800 PPP2CBP62714 309 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 PPP2CAP67775 309 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 DSC2Q02487 901 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 FOXC1Q12948 553 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 DARS2Q6PI48 645 aaKnown RBP15.23■□□□□ 0.03
SNX13-207ENST00000475800 SLC23A3Q6PIS1 610 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 CNTD1Q8N815 330 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 ARRDC2Q8TBH0 407 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 PBKQ96KB5 322 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 AGAP3Q96P47 875 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 NUSAP1Q9BXS6 441 aaKnown RBP15.23■□□□□ 0.03
SNX13-207ENST00000475800 MIR1-1HGQ9H1L0 117 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 SLC25A51Q9H1U9 297 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 KLHL8Q9P2G9 620 aaPredicted RBP15.23■□□□□ 0.03
SNX13-207ENST00000475800 PYCARDQ9ULZ3 195 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 PHTF1Q9UMS5 762 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 RPL26L1Q9UNX3 145 aaKnown RBP15.23■□□□□ 0.03
SNX13-207ENST00000475800 ZKSCAN5Q9Y2L8 839 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 PCDHGC4Q9Y5F7 938 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 RAI2Q9Y5P3 530 aa15.23■□□□□ 0.03
SNX13-207ENST00000475800 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.23■□□□□ 0.03
SNX13-207ENST00000475800 A0A1W2PQU0 124 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 RIOK3O14730 519 aaKnown RBP15.22■□□□□ 0.03
SNX13-207ENST00000475800 GJB3O75712 270 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 PGLSO95336 258 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 MAOBP27338 520 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 RBL1P28749 1068 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 RACK1P63244 317 aaKnown RBP15.22■□□□□ 0.03
SNX13-207ENST00000475800 WASHC5Q12768 1159 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 TRAF2Q12933 501 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 TEAD4Q15561 434 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 TMEM52BQ4KMG9 183 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 TMEM259Q4ZIN3 620 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 TRIM61Q5EBN2 209 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 ITPRIPL1Q6GPH6 555 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 SLC35F6Q8N357 371 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 CXorf40AQ8TE69 158 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 PDCD6IPQ8WUM4 868 aaKnown RBP15.22■□□□□ 0.03
SNX13-207ENST00000475800 ASB12Q8WXK4 309 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 SKA1Q96BD8 255 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 IMP4Q96G21 291 aaKnown RBP15.22■□□□□ 0.03
SNX13-207ENST00000475800 PPP1R2P1Q96PQ5 205 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 C1QTNF7Q9BXJ2 289 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 TDRD1Q9BXT4 1180 aaKnown RBP15.22■□□□□ 0.03
SNX13-207ENST00000475800 GLOD4Q9HC38 313 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 PCDH12Q9NPG4 1184 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 TMEM9BQ9NQ34 198 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 KCND1Q9NSA2 647 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 TMEM74BQ9NUR3 256 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 RALYQ9UKM9 306 aaKnown RBP15.22■□□□□ 0.03
SNX13-207ENST00000475800 DNPEPQ9ULA0 475 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 SLC6A14Q9UN76 642 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 PCDHB9Q9Y5E1 797 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 CABIN1Q9Y6J0 2220 aa15.22■□□□□ 0.03
SNX13-207ENST00000475800 TTC24A2A3L6 582 aaPredicted RBP15.21■□□□□ 0.03
SNX13-207ENST00000475800 PRAMEF26H0Y7S4 382 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 TOP3BO95985 862 aaKnown RBP15.21■□□□□ 0.03
SNX13-207ENST00000475800 CFIP05156 583 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 CYP2A6P11509 494 aaPredicted RBP15.21■□□□□ 0.03
SNX13-207ENST00000475800 AKT2P31751 481 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 MMP12P39900 470 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 CD86P42081 329 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 GRIA4P48058 902 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 AFF3P51826 1226 aaKnown RBP15.21■□□□□ 0.03
SNX13-207ENST00000475800 EPHB1P54762 984 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 NIPAL4Q0D2K0 466 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 SGCGQ13326 291 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 ZNF284Q2VY69 593 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 NAPEPLDQ6IQ20 393 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 USP45Q70EL2 814 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 B4GALNT4Q76KP1 1039 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 PID1Q7Z2X4 250 aa15.21■□□□□ 0.03
SNX13-207ENST00000475800 ZSWIM9Q86XI8 627 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms