RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CARD16Q5EG05 197 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 EGFLAMQ63HQ2 1017 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 KCTD16Q68DU8 428 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 OTUD6BQ8N6M0 293 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 CSGALNACT1Q8TDX6 532 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 UGT1A7Q9HAW7 530 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 UGT1A10Q9HAW8 530 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 UGT1A8Q9HAW9 530 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 CACNA2D2Q9NY47 1150 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 RABGEF1Q9UJ41 708 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 ARL5AQ9Y689 179 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 RPS6KL1Q9Y6S9 549 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 FAM155BO75949 473 aa18.21■□□□□ 0.51
ATG4B-217ENST00000475693 ATP5BP06576 529 aaKnown RBP18.21■□□□□ 0.51
ATG4B-217ENST00000475693 ABL2P42684 1182 aa18.21■□□□□ 0.51
ATG4B-217ENST00000475693 GEMIN4P57678 1058 aaKnown RBP18.21■□□□□ 0.51
ATG4B-217ENST00000475693 ZNF234Q14588 700 aa18.21■□□□□ 0.51
ATG4B-217ENST00000475693 FNDC3BQ53EP0 1204 aaKnown RBP18.21■□□□□ 0.51
ATG4B-217ENST00000475693 ZNF669Q96BR6 464 aaPredicted RBP18.21■□□□□ 0.51
ATG4B-217ENST00000475693 FRMD8Q9BZ67 464 aaPredicted RBP18.21■□□□□ 0.51
ATG4B-217ENST00000475693 TBK1Q9UHD2 729 aa18.21■□□□□ 0.51
ATG4B-217ENST00000475693 IGSF6O95976 241 aa18.21■□□□□ 0.5
ATG4B-217ENST00000475693 UGT2B4P06133 528 aa18.21■□□□□ 0.5
ATG4B-217ENST00000475693 CTSLP07711 333 aa18.21■□□□□ 0.5
ATG4B-217ENST00000475693 ERVK-10P10266 1014 aa18.21■□□□□ 0.5
ATG4B-217ENST00000475693 GCAP28676 217 aa18.21■□□□□ 0.5
ATG4B-217ENST00000475693 ATP1A2P50993 1020 aa18.21■□□□□ 0.5
ATG4B-217ENST00000475693 TMPRSS15P98073 1019 aa18.21■□□□□ 0.5
ATG4B-217ENST00000475693 KBTBD12Q3ZCT8 623 aa18.21■□□□□ 0.5
ATG4B-217ENST00000475693 ESRP1Q6NXG1 681 aaKnown RBP18.21■□□□□ 0.5
ATG4B-217ENST00000475693 ZNF557Q8N988 423 aaPredicted RBP18.21■□□□□ 0.5
ATG4B-217ENST00000475693 ZNF473Q8WTR7 871 aaKnown RBP18.21■□□□□ 0.5
ATG4B-217ENST00000475693 FEM1CQ96JP0 617 aa18.21■□□□□ 0.5
ATG4B-217ENST00000475693 PPANQ9NQ55 473 aaKnown RBP18.21■□□□□ 0.5
ATG4B-217ENST00000475693 SAMD15Q9P1V8 674 aa18.21■□□□□ 0.5
ATG4B-217ENST00000475693 TRAFD1O14545 582 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-217ENST00000475693 NUDT17P0C025 328 aa18.2■□□□□ 0.5
ATG4B-217ENST00000475693 MYZAPP0CAP1 466 aa18.2■□□□□ 0.5
ATG4B-217ENST00000475693 HNRNPH1P31943 449 aaKnown RBP18.2■□□□□ 0.5
ATG4B-217ENST00000475693 IL12RB1P42701 662 aa18.2■□□□□ 0.5
ATG4B-217ENST00000475693 SNRPD1P62314 119 aaKnown RBP18.2■□□□□ 0.5
ATG4B-217ENST00000475693 CRYMQ14894 314 aa18.2■□□□□ 0.5
ATG4B-217ENST00000475693 PON2Q15165 354 aa18.2■□□□□ 0.5
ATG4B-217ENST00000475693 LEXMQ3ZCV2 418 aa18.2■□□□□ 0.5
ATG4B-217ENST00000475693 SPDYCQ5MJ68 293 aa18.2■□□□□ 0.5
ATG4B-217ENST00000475693 PAF1Q8N7H5 531 aa18.2■□□□□ 0.5
ATG4B-217ENST00000475693 MDGA1Q8NFP4 955 aa18.2■□□□□ 0.5
ATG4B-217ENST00000475693 ARNT2Q9HBZ2 717 aa18.2■□□□□ 0.5
ATG4B-217ENST00000475693 POLR3BQ9NW08 1133 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-217ENST00000475693 BCCIPQ9P287 314 aaKnown RBP eCLIP18.2■□□□□ 0.5
ATG4B-217ENST00000475693 TCF20Q9UGU0 1960 aaKnown RBP18.2■□□□□ 0.5
ATG4B-217ENST00000475693 SPECC1L-ADORA2AF8WAN1 911 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 NDST3O95803 873 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 C1QAP02745 245 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 PRKCHP24723 683 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 NPY2RP49146 381 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 BCL2L1Q07817 233 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 ARSIQ5FYB1 569 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 TTC19Q6DKK2 380 aaPredicted RBP18.19■□□□□ 0.5
ATG4B-217ENST00000475693 CACUL1Q86Y37 369 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 CYP4X1Q8N118 509 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 CCT8L2Q96SF2 557 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 IL22Q9GZX6 179 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 SARDHQ9UL12 918 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 PIAS3Q9Y6X2 628 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 ZCWPW2A0A1B0GU75 182 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 ANKRD66B4E2M5 251 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 K7EQS6 105 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 LEFTY1O75610 366 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 CTHP32929 405 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 TIE1P35590 1138 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 GUCY1A3Q02108 690 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 QPCTQ16769 361 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 KRT71Q3SY84 523 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 ANKRD20A4Q4UJ75 823 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 C2orf27AQ580R0 203 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 AGBL2Q5U5Z8 902 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 WFIKKN2Q8TEU8 576 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 TTC25Q96NG3 672 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 P2RY13Q9BPV8 354 aa18.19■□□□□ 0.5
ATG4B-217ENST00000475693 PLK4O00444 970 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 FZD6O60353 706 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 PGAM1P18669 254 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 NNMTP40261 264 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 ST8SIA6P61647 398 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 CNGA3Q16281 694 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 GPR153Q6NV75 609 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 STK40Q8N2I9 435 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 PCDH20Q8N6Y1 951 aaKnown RBP18.18■□□□□ 0.5
ATG4B-217ENST00000475693 PIH1D2Q8WWB5 315 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 ISG20Q96AZ6 181 aaKnown RBP18.18■□□□□ 0.5
ATG4B-217ENST00000475693 LRRC39Q96DD0 335 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 PHACTR1Q9C0D0 580 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 SUDS3Q9H7L9 328 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-217ENST00000475693 FNDC3AQ9Y2H6 1198 aaKnown RBP18.18■□□□□ 0.5
ATG4B-217ENST00000475693 KIAA1549LQ6ZVL6 1849 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 EXOC1LA0A1B0GW35 172 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 SIN3BO75182 1162 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 PGLSO95336 258 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 EGFP01133 1207 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms