RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ZNF570Q96NI8 536 aa6.54□□□□□ -1.36
SMC5-203ENST00000475540 C1QTNF4Q9BXJ3 329 aa6.54□□□□□ -1.36
SMC5-203ENST00000475540 SLC13A4Q9UKG4 626 aa6.54□□□□□ -1.36
SMC5-203ENST00000475540 FAM96BQ9Y3D0 163 aa6.54□□□□□ -1.36
SMC5-203ENST00000475540 IGLV5-37A0A075B6J1 123 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 PRR23D1E9PI22 279 aaPredicted RBP6.53□□□□□ -1.36
SMC5-203ENST00000475540 HSPA12AO43301 675 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 PPP1R3DO95685 299 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 HEXAP06865 529 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 PRR23D2P0DMB1 279 aaPredicted RBP6.53□□□□□ -1.36
SMC5-203ENST00000475540 IRF1P10914 325 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 CD58P19256 250 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 GPTP24298 496 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 CHATP28329 748 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 GAS1P54826 345 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 DDR1Q08345 913 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 GRSF1Q12849 480 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMC5-203ENST00000475540 FOXD4Q12950 439 aaPredicted RBP6.53□□□□□ -1.36
SMC5-203ENST00000475540 MYBPHQ13203 477 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 GORABQ5T7V8 394 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 ZC3HC1Q86WB0 502 aaKnown RBP6.53□□□□□ -1.36
SMC5-203ENST00000475540 PGBD5Q8N414 524 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 ZCCHC9Q8N567 271 aaKnown RBP6.53□□□□□ -1.36
SMC5-203ENST00000475540 RBMXL3Q8N7X1 1067 aaKnown RBP6.53□□□□□ -1.36
SMC5-203ENST00000475540 BBS4Q96RK4 519 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 VEZTQ9HBM0 779 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 SAGE1Q9NXZ1 904 aa6.53□□□□□ -1.36
SMC5-203ENST00000475540 CISD1Q9NZ45 108 aaKnown RBP6.53□□□□□ -1.36
SMC5-203ENST00000475540 TEX13CA0A0J9YWL9 993 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 hDV102S1A0JD36 115 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 WNT9BO14905 357 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 ETFAP13804 333 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 GGT5P36269 586 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 PAFAH1B1P43034 410 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 COMPP49747 757 aaPredicted RBP6.52□□□□□ -1.37
SMC5-203ENST00000475540 RPL36AP83881 106 aaKnown RBP6.52□□□□□ -1.37
SMC5-203ENST00000475540 GALNT2Q10471 571 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 PPP2R5BQ15173 497 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 SF3B4Q15427 424 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMC5-203ENST00000475540 BAK1Q16611 211 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 C9orf57Q5W0N0 161 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 LRRC8EQ6NSJ5 796 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 HTRA1Q92743 480 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 ERGIC1Q969X5 290 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 MPHOSPH8Q99549 860 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 HEMGNQ9BXL5 484 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 C20orf141Q9NUB4 165 aa6.52□□□□□ -1.37
SMC5-203ENST00000475540 PLSCR5A0PG75 271 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 KLK8O60259 260 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 ZIC3O60481 467 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 GAGE7O76087 117 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 MT-CYBP00156 380 aaPredicted RBP6.51□□□□□ -1.37
SMC5-203ENST00000475540 GAGE12FP0CL80 117 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 GAGE12GP0CL81 117 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 GAGE12IP0CL82 117 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 ITGAXP20702 1163 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 EDN2P20800 178 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 GAGE1Q13065 139 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 GAGE4Q13068 117 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 DHX34Q14147 1143 aaKnown RBP6.51□□□□□ -1.37
SMC5-203ENST00000475540 RHBDF2Q6PJF5 856 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 SCCPDHQ8NBX0 429 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 LILRB1Q8NHL6 650 aaPredicted RBP6.51□□□□□ -1.37
SMC5-203ENST00000475540 FBXL8Q96CD0 374 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 KIF1BPQ96EK5 621 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 ADGRG7Q96K78 797 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 LMLNQ96KR4 655 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 OR1F2PQ96R84 312 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 HSPB7Q9UBY9 170 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 SNX9Q9Y5X1 595 aa6.51□□□□□ -1.37
SMC5-203ENST00000475540 ATXN2Q99700 1313 aaKnown RBP6.5□□□□□ -1.37
SMC5-203ENST00000475540 IGHV4-30-4P0DP06 118 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 ECT2LQ008S8 904 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 EEF1A2Q05639 463 aaKnown RBP6.5□□□□□ -1.37
SMC5-203ENST00000475540 COASYQ13057 564 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 CALCRLQ16602 461 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 TCTN1Q2MV58 587 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMC5-203ENST00000475540 ZNF114Q8NC26 417 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 RNF125Q96EQ8 232 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 SCMH1Q96GD3 660 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 IGSF21Q96ID5 467 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 KLHL15Q96M94 604 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 H2AFJQ9BTM1 129 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 DDX31Q9H8H2 851 aaKnown RBP6.5□□□□□ -1.37
SMC5-203ENST00000475540 MAGEE1Q9HCI5 957 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 BPIFA1Q9NP55 256 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 CDC14AQ9UNH5 594 aa6.5□□□□□ -1.37
SMC5-203ENST00000475540 SRRM3A6NNA2 597 aaPredicted RBP6.49□□□□□ -1.37
SMC5-203ENST00000475540 SMTNL1A8MU46 457 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 SLC16A5O15375 505 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 MMP2P08253 660 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 SSTR2P30874 369 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 STX2P32856 288 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 POU3F1Q03052 451 aaPredicted RBP6.49□□□□□ -1.37
SMC5-203ENST00000475540 DLG1Q12959 904 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 GRIK3Q13003 919 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 FAM69BQ5VUD6 431 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 NOXA1Q86UR1 476 aa6.49□□□□□ -1.37
SMC5-203ENST00000475540 EXOC8Q8IYI6 725 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms