RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ATXN7L2Q5T6C5 722 aaPredicted RBP12.71□□□□□ -0.37
SKA3-206ENST00000475251 PHF19Q5T6S3 580 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 ERAP2Q6P179 960 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 BORAQ6PGQ7 559 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 SPRED1Q7Z699 444 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 TAF8Q7Z7C8 310 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 NLRP14Q86W24 1093 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 ZFAND4Q86XD8 727 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 FAM71AQ8IYT1 594 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 Q8N9G6 341 aaPredicted RBP12.71□□□□□ -0.37
SKA3-206ENST00000475251 TBC1D31Q96DN5 1066 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 ANKMY1Q9P2S6 941 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 TUBD1Q9UJT1 453 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 TMEM59LQ9UK28 342 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 UBR5O95071 2799 aaPredicted RBP12.7□□□□□ -0.38
SKA3-206ENST00000475251 BOD1L1Q8NFC6 3051 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 C9orf172C9J069 976 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 CACNB4O00305 520 aaPredicted RBP12.7□□□□□ -0.38
SKA3-206ENST00000475251 BIN1O00499 593 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 CPNE6O95741 557 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 CYP11B1P15538 503 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 TIMP2P16035 220 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 SDC4P31431 198 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 ADRA1BP35368 520 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 ATP11AP98196 1134 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 APBA1Q02410 837 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 TCEA2Q15560 299 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 MANEALQ5VSG8 457 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 OGFOD3Q6PK18 319 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 PIM3Q86V86 326 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 CCDC112Q8NEF3 446 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 FAM46DQ8NEK8 389 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 ZNF564Q8TBZ8 553 aaPredicted RBP12.7□□□□□ -0.38
SKA3-206ENST00000475251 KIAA1524Q8TCG1 905 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 GPBAR1Q8TDU6 330 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 HMCESQ96FZ2 354 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 NDFIP2Q9NV92 336 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 FOXJ2Q9P0K8 574 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 LRIT1Q9P2V4 623 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 RWDD2AQ9UIY3 292 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 OR1A2Q9Y585 309 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 CHD5Q8TDI0 1954 aa12.7□□□□□ -0.38
SKA3-206ENST00000475251 LRP4O75096 1905 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 TNFRSF10CO14798 259 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 HGSO14964 777 aaPredicted RBP12.69□□□□□ -0.38
SKA3-206ENST00000475251 LRIG2O94898 1065 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 MTIF2P46199 727 aaKnown RBP12.69□□□□□ -0.38
SKA3-206ENST00000475251 KIAA1024LP59773 190 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 UBAP2LQ14157 1087 aaKnown RBP12.69□□□□□ -0.38
SKA3-206ENST00000475251 HLTFQ14527 1009 aaKnown RBP eCLIP12.69□□□□□ -0.38
SKA3-206ENST00000475251 UGP2Q16851 508 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 CDO1Q16878 200 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 TSR1Q2NL82 804 aaKnown RBP12.69□□□□□ -0.38
SKA3-206ENST00000475251 BRAT1Q6PJG6 821 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 LEKR1Q6ZMV7 388 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 DNAAF5Q86Y56 855 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 IRF2BP1Q8IU81 584 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 SLITRK4Q8IW52 837 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 OR56A4Q8NGH8 313 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 VOPP1Q96AW1 172 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 PDXPQ96GD0 296 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 CATSPER2Q96P56 530 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 FUCA2Q9BTY2 467 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 DPEP2Q9H4A9 486 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 COQ6Q9Y2Z9 468 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 DAAM1Q9Y4D1 1078 aa12.69□□□□□ -0.38
SKA3-206ENST00000475251 TSPAN11A1L157 253 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 CFAP69A5D8W1 941 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 B4DGG1 531 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 PDE2AO00408 941 aaPredicted RBP12.68□□□□□ -0.38
SKA3-206ENST00000475251 PCCBP05166 539 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 PNMA6AP0CW24 399 aaPredicted RBP12.68□□□□□ -0.38
SKA3-206ENST00000475251 ITIH2P19823 946 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 ETV5P41161 510 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 CCR10P46092 362 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 LIG3P49916 1009 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 YBEYP58557 167 aaPredicted RBP12.68□□□□□ -0.38
SKA3-206ENST00000475251 CYP4F2P78329 520 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 PEX6Q13608 980 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 RAPGEF1Q13905 1077 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 CLCA4Q14CN2 919 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 SPECC1LQ69YQ0 1117 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 TRNP1Q6NT89 227 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 STRADAQ7RTN6 431 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 LURAP1LQ8IV03 231 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 IL22RA1Q8N6P7 574 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 HTR3CQ8WXA8 447 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 ZNF641Q96N77 438 aaPredicted RBP12.68□□□□□ -0.38
SKA3-206ENST00000475251 TAAR9Q96RI9 348 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 CDH19Q9H159 772 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 SUV39H2Q9H5I1 410 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 SIX2Q9NPC8 291 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 METTL5Q9NRN9 209 aaKnown RBP12.68□□□□□ -0.38
SKA3-206ENST00000475251 DONSONQ9NYP3 566 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 ANAPC2Q9UJX6 822 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 AJAP1Q9UKB5 411 aaPredicted RBP12.68□□□□□ -0.38
SKA3-206ENST00000475251 PCDHGA3Q9Y5H0 932 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 AHCTF1Q8WYP5 2266 aa12.68□□□□□ -0.38
SKA3-206ENST00000475251 RHPN2P1A8MT19 583 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 AGRPO00253 132 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms