RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 TMEM131Q92545 1883 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.11■□□□□ 0.17
ITGB1-210ENST00000474568 MATN3O15232 486 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 LZTS3O60299 673 aaPredicted RBP16.11■□□□□ 0.17
ITGB1-210ENST00000474568 IPO7O95373 1038 aaKnown RBP16.11■□□□□ 0.17
ITGB1-210ENST00000474568 CPP00450 1065 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 RXRGP48443 463 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 MARCKSL1P49006 195 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 SUOXP51687 545 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 NAP1L1P55209 391 aaKnown RBP16.11■□□□□ 0.17
ITGB1-210ENST00000474568 DSC2Q02487 901 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 IRF4Q15306 451 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 INAVAQ3KP66 663 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 LRRC38Q5VT99 294 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 KAZNQ674X7 775 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 TIGD7Q6NT04 549 aaPredicted RBP16.11■□□□□ 0.17
ITGB1-210ENST00000474568 SLCO6A1Q86UG4 719 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 ZSCAN30Q86W11 494 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 LRRC49Q8IUZ0 686 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 CHCHD4Q8N4Q1 142 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 TP53I13Q8NBR0 393 aaPredicted RBP16.11■□□□□ 0.17
ITGB1-210ENST00000474568 BAHD1Q8TBE0 780 aaPredicted RBP16.11■□□□□ 0.17
ITGB1-210ENST00000474568 LENG8Q96PV6 779 aaPredicted RBP16.11■□□□□ 0.17
ITGB1-210ENST00000474568 LGMNQ99538 433 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 CDC6Q99741 560 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 BAG1Q99933 345 aaPredicted RBP16.11■□□□□ 0.17
ITGB1-210ENST00000474568 SEMA3CQ99985 751 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 DNAJC28Q9NX36 388 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 DDX56Q9NY93 547 aaKnown RBP16.11■□□□□ 0.17
ITGB1-210ENST00000474568 FTSJ1Q9UET6 329 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 SALL4Q9UJQ4 1053 aa16.11■□□□□ 0.17
ITGB1-210ENST00000474568 YKT6O15498 198 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 FFAR2O15552 330 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 PCCBP05166 539 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 KRT10P13645 584 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 MX2P20592 715 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 FECHP22830 423 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 CCNCP24863 283 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 RABIFP47224 123 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 RALGDSQ12967 914 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 FZD2Q14332 565 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 PTPRRQ15256 657 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 WSCD2Q2TBF2 565 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 DENND2CQ68D51 928 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 DAAM2Q86T65 1068 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 CCDC13Q8IYE1 715 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 TEX26Q8N6G2 289 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 DENND6BQ8NEG7 585 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 ASB12Q8WXK4 309 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 MAML1Q92585 1016 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 CENPTQ96BT3 561 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 CNDP2Q96KP4 475 aaKnown RBP16.1■□□□□ 0.17
ITGB1-210ENST00000474568 CNTNAP3BQ96NU0 1288 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 C1QTNF7Q9BXJ2 289 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 CEP41Q9BYV8 373 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 CNTNAP3Q9BZ76 1288 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 UCKL1Q9NWZ5 548 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 SEPT10Q9P0V9 454 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 B4GALT6Q9UBX8 382 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 DUSP10Q9Y6W6 482 aa16.1■□□□□ 0.17
ITGB1-210ENST00000474568 KCNK1O00180 336 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 HTRA2O43464 458 aaPredicted RBP16.09■□□□□ 0.17
ITGB1-210ENST00000474568 PSTPIP1O43586 416 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 SOCS5O75159 536 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 LDOC1O95751 146 aaPredicted RBP16.09■□□□□ 0.17
ITGB1-210ENST00000474568 JCHAINP01591 159 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 HLA-DQB2P05538 268 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 ELFN1P0C7U0 828 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 CCNB1P14635 433 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 CTPS1P17812 591 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 CDC25BP30305 580 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 HADHBP55084 474 aaKnown RBP16.09■□□□□ 0.17
ITGB1-210ENST00000474568 PFN3P60673 137 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 POLR2LP62875 67 aaKnown RBP16.09■□□□□ 0.17
ITGB1-210ENST00000474568 AP1B1Q10567 949 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 LRRC14Q15048 493 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 SLC9A4Q6AI14 798 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 DPPA4Q7L190 304 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 TPCN2Q8NHX9 752 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 KRT35Q92764 455 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 TSGA13Q96PP4 275 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 SMIM14Q96QK8 99 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 DESI2Q9BSY9 194 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 SCNM1Q9BWG6 230 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 POLR1EQ9GZS1 481 aaKnown RBP16.09■□□□□ 0.17
ITGB1-210ENST00000474568 KLK13Q9UKR3 277 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 APOBEC2Q9Y235 224 aaKnown RBP16.09■□□□□ 0.17
ITGB1-210ENST00000474568 RAI2Q9Y5P3 530 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 TRPM6Q9BX84 2022 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 CABIN1Q9Y6J0 2220 aa16.09■□□□□ 0.17
ITGB1-210ENST00000474568 A0A0A6YYK5 440 aaPredicted RBP16.08■□□□□ 0.16
ITGB1-210ENST00000474568 A0A0U1RQS6 177 aa16.08■□□□□ 0.16
ITGB1-210ENST00000474568 SPTY2D1-AS1A0A0U1RR47 76 aa16.08■□□□□ 0.16
ITGB1-210ENST00000474568 TNFSF14O43557 240 aa16.08■□□□□ 0.16
ITGB1-210ENST00000474568 RECQL5O94762 991 aaPredicted RBP16.08■□□□□ 0.16
ITGB1-210ENST00000474568 DGKAP23743 735 aa16.08■□□□□ 0.16
ITGB1-210ENST00000474568 THOP1P52888 689 aa16.08■□□□□ 0.16
ITGB1-210ENST00000474568 NIPAL4Q0D2K0 466 aa16.08■□□□□ 0.16
ITGB1-210ENST00000474568 ZBTB17Q13105 803 aa16.08■□□□□ 0.16
ITGB1-210ENST00000474568 DNAJC3Q13217 504 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms