RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 EPHB1P54762 984 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 ANAPC15P60006 121 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 GNB1P62873 340 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 TNFAIP2Q03169 654 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 ITGA9Q13797 1035 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 GALEQ14376 348 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 PDSS1Q5T2R2 415 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 SLC27A1Q6PCB7 646 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 NOTCH2NLQ7Z3S9 236 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 GALNT15Q8N3T1 639 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 KLHDC9Q8NEP7 349 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 ZNF653Q96CK0 615 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 ALG14Q96F25 216 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 NUP62CLQ9H1M0 184 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 PLEKHA5Q9HAU0 1116 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 METTL14Q9HCE5 456 aaKnown RBP1.89□□□□□ -2.11
CCDC39-203ENST00000473854 HCFC1R1Q9NWW0 138 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 FBXO40Q9UH90 709 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 PRDM15P57071 1507 aaPredicted RBP1.89□□□□□ -2.11
CCDC39-203ENST00000473854 C9orf84Q5VXU9 1444 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 VWDEQ8N2E2 1590 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 DIP2CQ9Y2E4 1556 aa1.89□□□□□ -2.11
CCDC39-203ENST00000473854 FRMPD2Q68DX3 1309 aaPredicted RBP1.89□□□□□ -2.11
CCDC39-203ENST00000473854 ATXN2Q99700 1313 aaKnown RBP1.89□□□□□ -2.11
CCDC39-203ENST00000473854 SETD1AO15047 1707 aaKnown RBP1.88□□□□□ -2.11
CCDC39-203ENST00000473854 KIAA1210Q9ULL0 1709 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 WDR7Q9Y4E6 1490 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 ROCK1Q13464 1354 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 ATP7AQ04656 1500 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 FAM135AQ9P2D6 1515 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 PREX1Q8TCU6 1659 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 hCG_2014768A0A024R1R8 64 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 WNT9BO14905 357 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 MID1O15344 667 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 SORBS2O94875 1100 aaKnown RBP1.88□□□□□ -2.11
CCDC39-203ENST00000473854 LARGE1O95461 756 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 NTSR2O95665 410 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 AMZ1Q400G9 498 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 FAM102BQ5T8I3 360 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 SATL1Q86VE3 508 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 CDC20BQ86Y33 519 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 MB21D2Q8IYB1 491 aaPredicted RBP1.88□□□□□ -2.11
CCDC39-203ENST00000473854 MAGEC3Q8TD91 643 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 TMEM190Q8WZ59 177 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 CYYR1Q96J86 154 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 POM121L2Q96KW2 1035 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 VGLL1Q99990 258 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.88□□□□□ -2.11
CCDC39-203ENST00000473854 SLC52A1Q9NWF4 448 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 RGL1Q9NZL6 768 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 MYO1AQ9UBC5 1043 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 DDX20Q9UHI6 824 aaKnown RBP1.88□□□□□ -2.11
CCDC39-203ENST00000473854 DTNAQ9Y4J8 743 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 PTPRGP23470 1445 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 ZNF644Q9H582 1327 aaPredicted RBP1.88□□□□□ -2.11
CCDC39-203ENST00000473854 RPRD2Q5VT52 1461 aaKnown RBP1.88□□□□□ -2.11
CCDC39-203ENST00000473854 PIK3C2BO00750 1634 aa1.88□□□□□ -2.11
CCDC39-203ENST00000473854 TRPM2O94759 1503 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 EFCAB6Q5THR3 1501 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 DUOX2Q9NRD8 1548 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 CLTCQ00610 1675 aaKnown RBP1.87□□□□□ -2.11
CCDC39-203ENST00000473854 SH2B2O14492 632 aaPredicted RBP1.87□□□□□ -2.11
CCDC39-203ENST00000473854 SYNMO15061 1565 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 CAVIN2O95810 425 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 GLI2P10070 1586 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 PRPH2P23942 346 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 CCR10P46092 362 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 RNASELQ05823 741 aaKnown RBP1.87□□□□□ -2.11
CCDC39-203ENST00000473854 PEX6Q13608 980 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 ALKBH1Q13686 389 aaKnown RBP1.87□□□□□ -2.11
CCDC39-203ENST00000473854 NCOA1Q15788 1441 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 ZFP69Q49AA0 526 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 GXYLT1Q4G148 440 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 ARL6IP4Q66PJ3 421 aaKnown RBP1.87□□□□□ -2.11
CCDC39-203ENST00000473854 ZNF774Q6NX45 483 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 KRBA2Q6ZNG9 492 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 SHFQ7M4L6 423 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 TRIM74Q86UV6 250 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 TRIM73Q86UV7 250 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 ZC3HC1Q86WB0 502 aaKnown RBP1.87□□□□□ -2.11
CCDC39-203ENST00000473854 APLFQ8IW19 511 aaPredicted RBP1.87□□□□□ -2.11
CCDC39-203ENST00000473854 RAVER1Q8IY67 606 aaKnown RBP1.87□□□□□ -2.11
CCDC39-203ENST00000473854 ARHGEF28Q8N1W1 1705 aaKnown RBP1.87□□□□□ -2.11
CCDC39-203ENST00000473854 FBXL16Q8N461 479 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 CREB3L4Q8TEY5 395 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 CLEC4CQ8WTT0 213 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 TM9SF4Q92544 642 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 PHKBQ93100 1093 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 CDCA5Q96FF9 252 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 TRIM31Q9BZY9 425 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 C2orf42Q9NWW7 574 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 UGGT1Q9NYU2 1555 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 ZNF624Q9P2J8 865 aaPredicted RBP1.87□□□□□ -2.11
CCDC39-203ENST00000473854 CLIP2Q9UDT6 1046 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 MYO3AQ8NEV4 1616 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 CLSPNQ9HAW4 1339 aa1.87□□□□□ -2.11
CCDC39-203ENST00000473854 QRICH2Q9H0J4 1663 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 ZMYM4Q5VZL5 1548 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 ARHGEF40Q8TER5 1519 aa1.86□□□□□ -2.11
CCDC39-203ENST00000473854 ANKRD26Q9UPS8 1709 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms