RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 ETAA1Q9NY74 926 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 PI4KBQ9UBF8 816 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 CAMK2AQ9UQM7 478 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 DRG1Q9Y295 367 aaKnown RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 CNPY2Q9Y2B0 182 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 DNAJC16Q9Y2G8 782 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 SLC27A6Q9Y2P4 619 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 SH3BP1Q9Y3L3 701 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 TTLL3Q9Y4R7 772 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 PCDHB7Q9Y5E2 793 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.51□□□□□ -2.01
CALD1-216ENST00000473714 SVILO95425 2214 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 ASCC3Q8N3C0 2202 aaKnown RBP2.51□□□□□ -2.01
CALD1-216ENST00000473714 CSMD1Q96PZ7 3565 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 ICE1Q9Y2F5 2266 aa2.51□□□□□ -2.01
CALD1-216ENST00000473714 PTPRBP23467 1997 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 ATMQ13315 3056 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CABIN1Q9Y6J0 2220 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 MROH5Q6ZUA9 1318 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CLSPNQ9HAW4 1339 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 SIPA1L1O43166 1804 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 PARP14Q460N5 1801 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 A0A087X0M5 115 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 PRAMEF33A0A0G2JMD5 474 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 A0A1B0GX30 115 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CLEC18AA5D8T8 446 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 A6NCN8 305 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 PGPEP1LA6NFU8 196 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 DDTLA6NHG4 134 aaPredicted RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 DIRC3C9JPN6 131 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 E7ENX8 843 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CCER2I3L3R5 266 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 PRAMEF10O60809 474 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 HNRNPCL1O60812 293 aaKnown RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 FAM20BO75063 409 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 ENTPD3O75355 529 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 SUN1O94901 812 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 WDR47O94967 919 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 AFPP02771 609 aaKnown RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 TDGF1P13385 188 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 TNNT1P13805 278 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 MMP8P22894 467 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 DNAJB1P25685 340 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 IGHMBP2P38935 993 aaKnown RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 MAN2A2P49641 1150 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CCR9P51686 369 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 DGKQP52824 942 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 PNLIPRP1P54315 467 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 DRG2P55039 364 aaKnown RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 NR1H2P55055 460 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 PSMC6P62333 389 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 SETQ01105 290 aaPredicted RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 MC2RQ01718 297 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 TAP2Q03519 686 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CALD1Q05682 793 aaKnown RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 ITIH3Q06033 890 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 GALNT2Q10471 571 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 TBL3Q12788 808 aaKnown RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 EIF2B5Q13144 721 aaKnown RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 MAMLD1Q13495 774 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 HLXQ14774 488 aaPredicted RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 TAF7Q15545 349 aaPredicted RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 SMAD1Q15797 465 aaKnown RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 TSTQ16762 297 aaKnown RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 LY6KQ17RY6 165 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 ZIK1Q3SY52 487 aaPredicted RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 TAF1BQ53T94 588 aaPredicted RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 DCAF17Q5H9S7 520 aaPredicted RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 NAA35Q5VZE5 725 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 DENND2CQ68D51 928 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 DGAT2L7PQ6IED9 249 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CES5AQ6NT32 575 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 FBXO42Q6P3S6 717 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 TSSK4Q6SA08 328 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CLEC18BQ6UXF7 455 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CCNI2Q6ZMN8 369 aaPredicted RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 B4GALNT4Q76KP1 1039 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 GPRIN1Q7Z2K8 1008 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 TRABD2AQ86V40 505 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CAND1Q86VP6 1230 aaKnown RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 MMP21Q8N119 569 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 OR8H2Q8N162 312 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CHCHD4Q8N4Q1 142 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 ZNF276Q8N554 614 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 ZNF366Q8N895 744 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 FAM71DQ8N9W8 422 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CLEC18CQ8NCF0 446 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 TOR1AIP2Q8NFQ8 470 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 LINS1Q8NG48 757 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 AFAP1L1Q8TED9 768 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 SLC22A17Q8WUG5 538 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 SNRNP27Q8WVK2 155 aaKnown RBP2.5□□□□□ -2.01
CALD1-216ENST00000473714 P2RX5Q93086 422 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 TOP1MTQ969P6 601 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 ZDHHC12Q96GR4 267 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 TWNKQ96RR1 684 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 YME1L1Q96TA2 773 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 CD180Q99467 661 aa2.5□□□□□ -2.01
CALD1-216ENST00000473714 MNTQ99583 582 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms