RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 ALDH4A1P30038 563 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 USP8P40818 1118 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 KRT85P78386 507 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 MTM1Q13496 603 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 LRRC73Q5JTD7 316 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 SPECC1LQ69YQ0 1117 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 ERAP2Q6P179 960 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 HEATR4Q86WZ0 1026 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 OR56A4Q8NGH8 313 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 LMO3Q8TAP4 145 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 SSC4DQ8WTU2 575 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 PDXPQ96GD0 296 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 CCDC74BQ96LY2 380 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 NPY6RQ99463 290 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 NCAPGQ9BPX3 1015 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 RETREG1Q9H6L5 497 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 UBE2TQ9NPD8 197 aaPredicted RBP14.06□□□□□ -0.16
SMURF1-203ENST00000472627 SLC39A1Q9NY26 324 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 DKK3Q9UBP4 350 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 OR1A2Q9Y585 309 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 LRRK1Q38SD2 2015 aa14.06□□□□□ -0.16
SMURF1-203ENST00000472627 MKRN2OSH3BPM6 223 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 PDE2AO00408 941 aaPredicted RBP14.05□□□□□ -0.16
SMURF1-203ENST00000472627 SMC2O95347 1197 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 PCCBP05166 539 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 FGF3P11487 239 aaPredicted RBP14.05□□□□□ -0.16
SMURF1-203ENST00000472627 PPP1R2P41236 205 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 GPR3P46089 330 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 WSCD2Q2TBF2 565 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 TMEM52BQ4KMG9 183 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 FAM129CQ86XR2 697 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 PASD1Q8IV76 773 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 NRSN1Q8IZ57 195 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 NLGN4XQ8N0W4 816 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 RCBTB1Q8NDN9 531 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 NLGN4YQ8NFZ3 816 aaPredicted RBP14.05□□□□□ -0.16
SMURF1-203ENST00000472627 CASKIN2Q8WXE0 1202 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 ART4Q93070 314 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 GSDMAQ96QA5 445 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 PRDM8Q9NQV8 689 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 PPARGC1AQ9UBK2 798 aaKnown RBP14.05□□□□□ -0.16
SMURF1-203ENST00000472627 KCTD3Q9Y597 815 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 SNX10Q9Y5X0 201 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 B3GALT1Q9Y5Z6 326 aa14.05□□□□□ -0.16
SMURF1-203ENST00000472627 IGHV5-10-1A0A0J9YXX1 117 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 TNFRSF10CO14798 259 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 NKX2-8O15522 239 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 ZNF202O95125 648 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 KRT7P08729 469 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 TIMP2P16035 220 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 KRT9P35527 623 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 MAPKAPK2P49137 400 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 LIMK2P53671 638 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 KIAA1024LP59773 190 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 RNASE9P60153 205 aaKnown RBP14.04□□□□□ -0.16
SMURF1-203ENST00000472627 B4GALNT1Q00973 533 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 GRM3Q14832 879 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 DEFB109BQ30KR1 87 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 SLC25A52Q3SY17 297 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 TMPRSS9Q7Z410 1059 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 KDELC2Q7Z4H8 507 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 ZNF354CQ86Y25 554 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 OR4D9Q8NGE8 314 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 HCAR2Q8TDS4 363 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 TTYH3Q9C0H2 523 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 MAGEH1Q9H213 219 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 TRIT1Q9H3H1 467 aaKnown RBP14.04□□□□□ -0.16
SMURF1-203ENST00000472627 CUEDC1Q9NWM3 386 aaPredicted RBP14.04□□□□□ -0.16
SMURF1-203ENST00000472627 PCDHGC3Q9UN70 934 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 NBPF19A0A087WUL8 3843 aa14.04□□□□□ -0.16
SMURF1-203ENST00000472627 SDK2Q58EX2 2172 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 TRIM49BA6NDI0 452 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 B4E171 279 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 RAMP2O60895 175 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 GNA14O95837 355 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 ERBB2P04626 1255 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 TCN2P20062 427 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 ACVRL1P37023 503 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 TSPAN7P41732 249 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 PPM1FP49593 454 aaPredicted RBP14.03□□□□□ -0.16
SMURF1-203ENST00000472627 PMS1P54277 932 aaKnown RBP14.03□□□□□ -0.16
SMURF1-203ENST00000472627 OR1D5P58170 312 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 PTK2Q05397 1052 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 ILF3Q12906 894 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMURF1-203ENST00000472627 AGERQ15109 404 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 ARHGAP44Q17R89 818 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 CRTC2Q53ET0 693 aaPredicted RBP14.03□□□□□ -0.16
SMURF1-203ENST00000472627 ATXN7L2Q5T6C5 722 aaPredicted RBP14.03□□□□□ -0.16
SMURF1-203ENST00000472627 HIST2H2BCQ6DN03 193 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 RWDD4Q6NW29 188 aaKnown RBP14.03□□□□□ -0.16
SMURF1-203ENST00000472627 ZNF438Q7Z4V0 828 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 GALNT11Q8NCW6 608 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 HMCESQ96FZ2 354 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 NUDT22Q9BRQ3 303 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 ZPBPQ9BS86 351 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 GSDMCQ9BYG8 508 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 HOOK1Q9UJC3 728 aaKnown RBP14.03□□□□□ -0.16
SMURF1-203ENST00000472627 MOSPD1Q9UJG1 213 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 TP53TG5Q9Y2B4 290 aa14.03□□□□□ -0.16
SMURF1-203ENST00000472627 COQ6Q9Y2Z9 468 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms