RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 IL37Q9NZH6 218 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 USP36Q9P275 1121 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 KLK13Q9UKR3 277 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 PLA2G4CQ9UP65 541 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 PCDHGA1Q9Y5H4 931 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 DSPP15924 2871 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 SPAG17Q6Q759 2223 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 BAHCC1Q9P281 2608 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 ZFYVE26Q68DK2 2539 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 PDXKO00764 312 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 SPTLC2O15270 562 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 IRAK2O43187 625 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 TNFSF14O43557 240 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 CALUO43852 315 aaPredicted RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 PCDHGA12O60330 932 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 CUTAO60888 179 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 ATP2C2O75185 946 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 GJB3O75712 270 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 CYP7B1O75881 506 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 ASS1P00966 412 aaKnown RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 PENKP01210 267 aaPredicted RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 DNTTP04053 509 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 IRF1P10914 325 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 KRT13P13646 458 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 CD59P13987 128 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 SLC9A1P19634 815 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 ACO1P21399 889 aaKnown RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 GTF2H1P32780 548 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 PIK3CAP42336 1068 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 CASP5P51878 434 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 MFAP3P55082 362 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 UCNP55089 124 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 C21orf59P57076 290 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 MYL6P60660 151 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 ST8SIA6P61647 398 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 PPP2CBP62714 309 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 PPP2CAP67775 309 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 ZXDBP98169 803 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 HGFACQ04756 655 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 SCAPQ12770 1279 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 MTA1Q13330 715 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 ILKQ13418 452 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 ENPP2Q13822 863 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 ZACNQ401N2 412 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 MPPE1Q53F39 396 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 MPP7Q5T2T1 576 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 DCAF12L1Q5VU92 463 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 EGFLAMQ63HQ2 1017 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 NUGGCQ68CJ6 796 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 NAIF1Q69YI7 327 aaPredicted RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 USP30Q70CQ3 517 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 EPM2AIP1Q7L775 607 aaPredicted RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 CXXC5Q7LFL8 322 aaKnown RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 KANSL1Q7Z3B3 1105 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 TMPRSS12Q86WS5 348 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 THNSL2Q86YJ6 484 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 TMPRSS6Q8IU80 811 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 FUKQ8N0W3 1084 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 AHI1Q8N157 1196 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 CRYBG2Q8N1P7 616 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 Q8N1X5 172 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 CPXM2Q8N436 756 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 ZCCHC9Q8N567 271 aaKnown RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 KDM1BQ8NB78 822 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 OR2T3Q8NH03 318 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 LRRC15Q8TF66 581 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 SNX19Q92543 992 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 IGSF8Q969P0 613 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 LRRC37BQ96QE4 947 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 PPP1R9BQ96SB3 815 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 ELF4Q99607 663 aaPredicted RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 HNRNPABQ99729 332 aaKnown RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 FOXB1Q99853 325 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 C7orf25Q9BPX7 421 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 MRPL45Q9BRJ2 306 aaKnown RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 ACE2Q9BYF1 805 aaPredicted RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 B3GNT5Q9BYG0 378 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 GTPBP4Q9BZE4 634 aaKnown RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 UBXN6Q9BZV1 441 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 CIPCQ9C0C6 399 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 BTBD1Q9H0C5 482 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 LHX5Q9H2C1 402 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 MS4A5Q9H3V2 200 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 DPEP3Q9H4B8 488 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 DEF6Q9H4E7 631 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 GAREM1Q9H706 876 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 SMYD3Q9H7B4 428 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.64□□□□□ -1.83
XRN1-209ENST00000472625 OXSMQ9NWU1 459 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 WSB2Q9NYS7 404 aaPredicted RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 THAP10Q9P2Z0 257 aaPredicted RBP3.64□□□□□ -1.83
XRN1-209ENST00000472625 USP25Q9UHP3 1055 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 CFAP45Q9UL16 551 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 NCKAP1Q9Y2A7 1128 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 STON1Q9Y6Q2 735 aa3.64□□□□□ -1.83
XRN1-209ENST00000472625 ITPR1Q14643 2758 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 DOCK6Q96HP0 2047 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 A0A087WV48 116 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 TLDC2A0PJX2 215 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 LRRC72A6NJI9 287 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms