RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 CDC14CA4D256 554 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 TRIM49BA6NDI0 452 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 A8MX80 341 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 HGSO14964 777 aaPredicted RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 SLC16A3O15427 465 aaKnown RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 CAPN5O15484 640 aaPredicted RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 B4GAT1O43505 415 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 BUB1O43683 1085 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 NUDT21O43809 227 aaKnown RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 PIGNO95427 931 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 ECEL1O95672 775 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 POP4O95707 220 aaKnown RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 MYL1P05976 194 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 TFE3P19532 575 aaPredicted RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 PEX5P50542 639 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 ARSDP51689 593 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 B4GALNT1Q00973 533 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 MC1RQ01726 317 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 DPYDQ12882 1025 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 HLTFQ14527 1009 aaKnown RBP eCLIP6.93□□□□□ -1.39e-7■□□□□ 8.3
HDAC1-204ENST00000471488 WSCD2Q2TBF2 565 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 MYLK3Q32MK0 819 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 DENND2CQ68D51 928 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 CAPRIN2Q6IMN6 1127 aaKnown RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 ERAP2Q6P179 960 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 FOXR2Q6PJQ5 311 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 SLC30A9Q6PML9 568 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 C11orf57Q6ZUT1 292 aaPredicted RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 BEND5Q7L4P6 421 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 ZNF761Q86XN6 746 aaPredicted RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 CCDC13Q8IYE1 715 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 PLA2G15Q8NCC3 412 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 C1orf131Q8NDD1 294 aaKnown RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 OR2AP1Q8NGE2 309 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 OR56A4Q8NGH8 313 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 PATE1Q8WXA2 126 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 ASB12Q8WXK4 309 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 SLC35C1Q96A29 364 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 SLC45A3Q96JT2 553 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 EXOC2Q96KP1 924 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 GDAP1L1Q96MZ0 367 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 SLC2A13Q96QE2 648 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 CPXM1Q96SM3 734 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 RBM15Q96T37 977 aaKnown RBP eCLIP6.93□□□□□ -1.37e-7■■■■□ 24.8
HDAC1-204ENST00000471488 EFHD1Q9BUP0 239 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 OSBPL1AQ9BXW6 950 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 ZYG11BQ9C0D3 744 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 CDH19Q9H159 772 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 PDCL3Q9H2J4 239 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 CARS2Q9HA77 564 aaKnown RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 METTL14Q9HCE5 456 aaKnown RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 UBE2TQ9NPD8 197 aaPredicted RBP6.93□□□□□ -1.3
HDAC1-204ENST00000471488 PLCB1Q9NQ66 1216 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 ANLNQ9NQW6 1124 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 TMEM9Q9P0T7 183 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 KCND3Q9UK17 655 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 CFAP45Q9UL16 551 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 COQ4Q9Y3A0 265 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 CHD5Q8TDI0 1954 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 CACNA1DQ01668 2161 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 ILVBLA1L0T0 632 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 TMEM202A6NGA9 273 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 GOLGA8SH3BPF8 625 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 TOR1BO14657 336 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 DAB1O75553 588 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 STK17BO94768 372 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 IGSF6O95976 241 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 ERBB2P04626 1255 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 PNLIPP16233 465 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 ELAVL4P26378 380 aaKnown RBP6.92□□□□□ -1.3
HDAC1-204ENST00000471488 AK4P27144 223 aaPredicted RBP6.92□□□□□ -1.3
HDAC1-204ENST00000471488 MAP4P27816 1152 aaKnown RBP6.92□□□□□ -1.3
HDAC1-204ENST00000471488 DLSTP36957 453 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 PRCPP42785 496 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 GNPDA1P46926 289 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 CD97P48960 835 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 LIG3P49916 1009 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 NDUFA8P51970 172 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 RIPPLY3P57055 190 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 RHOAP61586 193 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 FKBP3Q00688 224 aaKnown RBP6.92□□□□□ -1.3
HDAC1-204ENST00000471488 FOXM1Q08050 763 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 SLC20A2Q08357 652 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 ELP6Q0PNE2 266 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 ILF3Q12906 894 aaKnown RBP eCLIP6.92□□□□□ -1.3
HDAC1-204ENST00000471488 MTA1Q13330 715 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 MRPL49Q13405 166 aaKnown RBP6.92□□□□□ -1.3
HDAC1-204ENST00000471488 ZCWPW2Q504Y3 356 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 BRMS1LQ5PSV4 323 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 ISM2Q6H9L7 571 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 DOK6Q6PKX4 331 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 MAMDC2Q7Z304 686 aaPredicted RBP6.92□□□□□ -1.3
HDAC1-204ENST00000471488 TMEM110Q86TL2 294 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 FAM131BQ86XD5 332 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 STK32AQ8WU08 396 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 ZNF606Q8WXB4 792 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 HMCESQ96FZ2 354 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 ELMO2Q96JJ3 720 aa6.92□□□□□ -1.3
HDAC1-204ENST00000471488 TBCBQ99426 244 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms