RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 THOP1P52888 689 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 POLR2LP62875 67 aaKnown RBP13.62□□□□□ -0.23
HMGN1-211ENST00000471260 DPYSQ14117 519 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 AGERQ15109 404 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 CFAP58Q5T655 872 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 HES3Q5TGS1 186 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 MDM1Q8TC05 714 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 TEKT4Q8WW24 435 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 EXOC2Q96KP1 924 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 ZNF599Q96NL3 588 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 CINPQ9BW66 212 aaPredicted RBP13.62□□□□□ -0.23
HMGN1-211ENST00000471260 NRSN2Q9GZP1 204 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 ATP13A3Q9H7F0 1226 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 IP6K2Q9UHH9 426 aa13.62□□□□□ -0.23
HMGN1-211ENST00000471260 ACACAQ13085 2346 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 TDRD6O60522 2096 aaKnown RBP13.61□□□□□ -0.23
HMGN1-211ENST00000471260 A0A1W2PQ67 120 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 FAM149AA5PLN7 773 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 TMEM110-MUSTN1A8MSY1 372 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 K7ESM1 405 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 MFAP3LO75121 409 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 PIGNO95427 931 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 JUNDP17535 347 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 CYP4F3Q08477 520 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 ZCCHC8Q6NZY4 707 aaKnown RBP13.61□□□□□ -0.23
HMGN1-211ENST00000471260 POLNQ7Z5Q5 900 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 SRLQ86TD4 932 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 KRT222Q8N1A0 295 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 TP53I13Q8NBR0 393 aaPredicted RBP13.61□□□□□ -0.23
HMGN1-211ENST00000471260 TSEN2Q8NCE0 465 aaKnown RBP13.61□□□□□ -0.23
HMGN1-211ENST00000471260 MNS1Q8NEH6 495 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 ZNF548Q8NEK5 533 aaPredicted RBP13.61□□□□□ -0.23
HMGN1-211ENST00000471260 SPOCK2Q92563 424 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 ECHDC3Q96DC8 303 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 NXPE2Q96DL1 559 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 PSKH2Q96QS6 385 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 THAP2Q9H0W7 228 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 SPASTQ9UBP0 616 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 SEPT3Q9UH03 358 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 SALL4Q9UJQ4 1053 aa13.61□□□□□ -0.23
HMGN1-211ENST00000471260 MYO1FO00160 1098 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 DFFAO00273 331 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 FFAR2O15552 330 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 AQP9O43315 295 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 BUB1BO60566 1050 aaPredicted RBP13.6□□□□□ -0.23
HMGN1-211ENST00000471260 CYP1A2P05177 515 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 IL1R2P27930 398 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 HNRNPH3P31942 346 aaKnown RBP13.6□□□□□ -0.23
HMGN1-211ENST00000471260 SERPINB6P35237 376 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 IGFALSP35858 605 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 HSPA9P38646 679 aaKnown RBP13.6□□□□□ -0.23
HMGN1-211ENST00000471260 BLKP51451 505 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 AP1S1P61966 158 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 BCL2L1Q07817 233 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 DMTNQ08495 405 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 EIF2B5Q13144 721 aaKnown RBP13.6□□□□□ -0.23
HMGN1-211ENST00000471260 TARDBPQ13148 414 aaKnown RBP eCLIP13.6□□□□□ -0.236e-12■□□□□ 10.5
HMGN1-211ENST00000471260 LBRQ14739 615 aaKnown RBP13.6□□□□□ -0.23
HMGN1-211ENST00000471260 RTP5Q14D33 572 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 LRRC14Q15048 493 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 ZNF542PQ5EBM4 170 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 ALKBH5Q6P6C2 394 aaKnown RBP13.6□□□□□ -0.23
HMGN1-211ENST00000471260 TMCO3Q6UWJ1 677 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 MACC1Q6ZN28 852 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 CAMK1DQ8IU85 385 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 LRRC49Q8IUZ0 686 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 BBS5Q8N3I7 341 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 SDR16C5Q8N3Y7 309 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 NPWQ8N729 165 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 DCBLD1Q8N8Z6 715 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 NETO2Q8NC67 525 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 CPLX3Q8WVH0 158 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 APOLD1Q96LR9 279 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 WRAP53Q9BUR4 548 aaKnown RBP13.6□□□□□ -0.23
HMGN1-211ENST00000471260 PCDH12Q9NPG4 1184 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 FAM53CQ9NYF3 392 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 RCOR3Q9P2K3 495 aaPredicted RBP13.6□□□□□ -0.23
HMGN1-211ENST00000471260 LCMT1Q9UIC8 334 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 ANAPC7Q9UJX3 599 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 CLCA2Q9UQC9 943 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 ATP8A1Q9Y2Q0 1164 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 CFAP47Q6ZTR5 3102 aa13.6□□□□□ -0.23
HMGN1-211ENST00000471260 A0A087X0T9 212 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.59□□□□□ -0.23
HMGN1-211ENST00000471260 GYPCP04921 128 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 FAM228BP0C875 321 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 RARAP10276 462 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 C6P13671 934 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 ITIH2P19823 946 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 NFKBIAP25963 317 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 HTR1BP28222 390 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 CASQ1P31415 396 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 EIF4A3P38919 411 aaKnown RBP13.59□□□□□ -0.23
HMGN1-211ENST00000471260 MMP12P39900 470 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 RGRP47804 291 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 INSM1Q01101 510 aaPredicted RBP13.59□□□□□ -0.23
HMGN1-211ENST00000471260 PPARDQ03181 441 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 HADHQ16836 314 aaKnown RBP13.59□□□□□ -0.23
HMGN1-211ENST00000471260 RALGPS1Q5JS13 557 aa13.59□□□□□ -0.23
HMGN1-211ENST00000471260 LRRC73Q5JTD7 316 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms