RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 MOB3CQ70IA8 216 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 PRSS45Q7RTY3 260 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 TBC1D26Q86UD7 250 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 FAM160B2Q86V87 743 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ZC3HC1Q86WB0 502 aaKnown RBP1.47□□□□□ -2.17
UBXN4-207ENST00000471246 FOXP4Q8IVH2 680 aaPredicted RBP1.47□□□□□ -2.17
UBXN4-207ENST00000471246 HERC6Q8IVU3 1022 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ZNF441Q8N8Z8 693 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 POC1AQ8NBT0 407 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 LSM14AQ8ND56 463 aaKnown RBP1.47□□□□□ -2.17
UBXN4-207ENST00000471246 GJC3Q8NFK1 279 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 NEK9Q8TD19 979 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 SORCS1Q8WY21 1168 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 CCT6BQ92526 530 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 SH3KBP1Q96B97 665 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ZC3HAV1LQ96H79 300 aaKnown RBP1.47□□□□□ -2.17
UBXN4-207ENST00000471246 LRFN5Q96NI6 719 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 TWNKQ96RR1 684 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 CSF3RQ99062 836 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 MMTAG2Q9BU76 263 aaKnown RBP1.47□□□□□ -2.17
UBXN4-207ENST00000471246 NUF2Q9BZD4 464 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 UBTD1Q9HAC8 227 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 EBF2Q9HAK2 575 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 NOD2Q9HC29 1040 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 SDF2L1Q9HCN8 221 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ALKBH4Q9NXW9 302 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 CISD1Q9NZ45 108 aaKnown RBP1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ZNF224Q9NZL3 707 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 CTNNAL1Q9UBT7 734 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 SLCO3A1Q9UIG8 710 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 SIX4Q9UIU6 781 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ERRFI1Q9UJM3 462 aaPredicted RBP1.47□□□□□ -2.17
UBXN4-207ENST00000471246 CDC14AQ9UNH5 594 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 PCDHGB3Q9Y5G1 929 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 PCDHAC2Q9Y5I4 1007 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 A3GALT2U3KPV4 340 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 HNRNPCL2B2RXH8 293 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 KLRF2D3W0D1 207 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 SOCS6O14544 535 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 KLK8O60259 260 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 TSPAN3O60637 253 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 LMX1BO60663 402 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 NDUFS7O75251 213 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 TCEA3O75764 348 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 NDUFB4O95168 129 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 CLDN14O95500 239 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 LDHAP00338 332 aaKnown RBP1.46□□□□□ -2.18
UBXN4-207ENST00000471246 PCNAP12004 261 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 SLC2A4P14672 509 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 PTPN2P17706 415 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 ITGAXP20702 1163 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 EFNA5P52803 228 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 CLDN2P57739 230 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 BRWD1-AS2P59051 145 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 ARL16Q0P5N6 197 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 TBL3Q12788 808 aaKnown RBP1.46□□□□□ -2.18
UBXN4-207ENST00000471246 TROAPQ12815 778 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 ZBTB17Q13105 803 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 OS9Q13438 667 aaPredicted RBP1.46□□□□□ -2.18
UBXN4-207ENST00000471246 SLC12A1Q13621 1099 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 OASLQ15646 514 aaKnown RBP1.46□□□□□ -2.18
UBXN4-207ENST00000471246 EFNB3Q15768 340 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 SOWAHAQ2M3V2 549 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 GRAMD1BQ3KR37 738 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 AMZ1Q400G9 498 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 MMEL1Q495T6 779 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 FBXO47Q5MNV8 452 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 MAP3K21Q5TCX8 1036 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 SERTAD4-AS1Q5TG53 156 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 STPG1Q5TH74 334 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 DSTYKQ6XUX3 929 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 CCNI2Q6ZMN8 369 aaPredicted RBP1.46□□□□□ -2.18
UBXN4-207ENST00000471246 C9orf139Q6ZV77 190 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 TUBA1AQ71U36 451 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 NOXA1Q86UR1 476 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 EXOC3L1Q86VI1 746 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 DCUN1D3Q8IWE4 304 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 KIAA2013Q8IYS2 634 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 NKAPQ8N5F7 415 aaKnown RBP1.46□□□□□ -2.18
UBXN4-207ENST00000471246 LMNTD1Q8N9Z9 388 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 KBTBD3Q8NAB2 608 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 USP38Q8NB14 1042 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 SPATA22Q8NHS9 363 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 CREB3L4Q8TEY5 395 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 STAMQ92783 540 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 SNAPC3Q92966 411 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 TMEM19Q96HH6 336 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 FEM1CQ96JP0 617 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 C3orf30Q96M34 536 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 UHRF2Q96PU4 802 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 CD180Q99467 661 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 EYA3Q99504 573 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 TUBA1CQ9BQE3 449 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 REEP2Q9BRK0 252 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 MXRA8Q9BRK3 442 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 PYM1Q9BRP8 204 aaKnown RBP1.46□□□□□ -2.18
UBXN4-207ENST00000471246 PHF7Q9BWX1 381 aaPredicted RBP1.46□□□□□ -2.18
UBXN4-207ENST00000471246 TTYH1Q9H313 450 aaPredicted RBP1.46□□□□□ -2.18
UBXN4-207ENST00000471246 EVA1AQ9H8M9 152 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 PTPRHQ9HD43 1115 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms