RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 PGAP2Q9UHJ9 254 aa5.61□□□□□ -1.51
SSB-209ENST00000470621 SRRM3A6NNA2 597 aaPredicted RBP5.6□□□□□ -1.51
SSB-209ENST00000470621 C4orf47A7E2U8 309 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 IKBKBO14920 756 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 KCNJ13O60928 360 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 SERPINI2O75830 405 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 CH25HO95992 272 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 ETFAP13804 333 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 KCNJ4P48050 445 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 GRSF1Q12849 480 aaKnown RBP eCLIP5.6□□□□□ -1.51
SSB-209ENST00000470621 PPP2R5BQ15173 497 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 MMEL1Q495T6 779 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 ALFQ53S48 1182 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 SGO1Q5FBB7 561 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 ACAD10Q6JQN1 1059 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 RRM2BQ7LG56 351 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 NFKBIDQ8NI38 313 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 SMYD2Q9NRG4 433 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 PCDHB16Q9NRJ7 776 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 PPP1R14DQ9NXH3 145 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 MPP6Q9NZW5 540 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 NFE2L3Q9Y4A8 694 aa5.6□□□□□ -1.51
SSB-209ENST00000470621 SEC31AO94979 1220 aaKnown RBP5.59□□□□□ -1.51
SSB-209ENST00000470621 HARS2P49590 506 aaKnown RBP5.59□□□□□ -1.51
SSB-209ENST00000470621 DDR1Q08345 913 aa5.59□□□□□ -1.51
SSB-209ENST00000470621 DHX34Q14147 1143 aaKnown RBP5.59□□□□□ -1.51
SSB-209ENST00000470621 EFNB3Q15768 340 aa5.59□□□□□ -1.51
SSB-209ENST00000470621 SETMARQ53H47 684 aaPredicted RBP5.59□□□□□ -1.51
SSB-209ENST00000470621 HSP90AB4PQ58FF6 505 aa5.59□□□□□ -1.51
SSB-209ENST00000470621 ANKRD54Q6NXT1 300 aa5.59□□□□□ -1.51
SSB-209ENST00000470621 PDXDC1Q6P996 788 aa5.59□□□□□ -1.51
SSB-209ENST00000470621 LCTLQ6UWM7 567 aa5.59□□□□□ -1.51
SSB-209ENST00000470621 MMS22LQ6ZRQ5 1243 aa5.59□□□□□ -1.51
SSB-209ENST00000470621 NOC3LQ8WTT2 800 aaKnown RBP5.59□□□□□ -1.51
SSB-209ENST00000470621 FAM216AQ8WUB2 273 aa5.59□□□□□ -1.51
SSB-209ENST00000470621 NUDCD2Q8WVJ2 157 aa5.59□□□□□ -1.51
SSB-209ENST00000470621 NR1H4Q96RI1 486 aaPredicted RBP5.59□□□□□ -1.51
SSB-209ENST00000470621 FIZ1Q96SL8 496 aa5.59□□□□□ -1.51
SSB-209ENST00000470621 SEC62Q99442 399 aaKnown RBP5.59□□□□□ -1.51
SSB-209ENST00000470621 MAGEE1Q9HCI5 957 aa5.59□□□□□ -1.51
SSB-209ENST00000470621 FAM96BQ9Y3D0 163 aa5.59□□□□□ -1.51
SSB-209ENST00000470621 LSM4Q9Y4Z0 139 aaKnown RBP5.59□□□□□ -1.51
SSB-209ENST00000470621 LRP12Q9Y561 859 aa5.59□□□□□ -1.51
SSB-209ENST00000470621 HSPA12AO43301 675 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 PPP1R3DO95685 299 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 TFP02787 698 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 FCGR1AP12314 374 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 AGAP20933 346 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 EPHA8P29322 1005 aaPredicted RBP5.58□□□□□ -1.52
SSB-209ENST00000470621 SSTR2P30874 369 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 CCKBRP32239 447 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 ABCD1P33897 745 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 SHMT1P34896 483 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 NFATC4Q14934 902 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 HLFQ16534 295 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 ALG11Q2TAA5 492 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 PAPPA-AS1Q5QFB9 102 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 INTS11Q5TA45 600 aaKnown RBP5.58□□□□□ -1.52
SSB-209ENST00000470621 FAM69BQ5VUD6 431 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.58□□□□□ -1.52
SSB-209ENST00000470621 CNTROBQ8N137 903 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 CADM4Q8NFZ8 388 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 FBXL8Q96CD0 374 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 IL25Q9H293 177 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 PLEKHA4Q9H4M7 779 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 CD93Q9NPY3 652 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 A4GNTQ9UNA3 340 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 SCINQ9Y6U3 715 aa5.58□□□□□ -1.52
SSB-209ENST00000470621 KDM3AQ9Y4C1 1321 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 ZBTB11O95625 1053 aaPredicted RBP5.57□□□□□ -1.52
SSB-209ENST00000470621 MT-CYBP00156 380 aaPredicted RBP5.57□□□□□ -1.52
SSB-209ENST00000470621 KIF5AQ12840 1032 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 ITGADQ13349 1161 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 KEAP1Q14145 624 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 NADSYN1Q6IA69 706 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.57□□□□□ -1.52
SSB-209ENST00000470621 QSOX2Q6ZRP7 698 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 CREB3L2Q70SY1 520 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 PGBD5Q8N414 524 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 WASF1Q92558 559 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 PREBQ9HCU5 417 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 NOX4Q9NPH5 578 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 SELENONQ9NZV5 590 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 SLC9A2Q9UBY0 812 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 CDC14AQ9UNH5 594 aa5.57□□□□□ -1.52
SSB-209ENST00000470621 A0A0U1RQJ8 604 aa5.56□□□□□ -1.52
SSB-209ENST00000470621 hDV102S1A0JD36 115 aa5.56□□□□□ -1.52
SSB-209ENST00000470621 TAF4O00268 1085 aa5.56□□□□□ -1.52
SSB-209ENST00000470621 TGFB1I1O43294 461 aa5.56□□□□□ -1.52
SSB-209ENST00000470621 ZIC3O60481 467 aa5.56□□□□□ -1.52
SSB-209ENST00000470621 AFPP02771 609 aaKnown RBP5.56□□□□□ -1.52
SSB-209ENST00000470621 CYC1P08574 325 aa5.56□□□□□ -1.52
SSB-209ENST00000470621 CHATP28329 748 aa5.56□□□□□ -1.52
SSB-209ENST00000470621 ICAM3P32942 547 aa5.56□□□□□ -1.52
SSB-209ENST00000470621 EIF2S3P41091 472 aaKnown RBP5.56□□□□□ -1.52
SSB-209ENST00000470621 CASP6P55212 293 aa5.56□□□□□ -1.52
SSB-209ENST00000470621 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
SSB-209ENST00000470621 NEXNQ0ZGT2 675 aa5.56□□□□□ -1.52
SSB-209ENST00000470621 G3BP1Q13283 466 aaKnown RBP eCLIP5.56□□□□□ -1.523e-8■□□□□ 9.4
SSB-209ENST00000470621 HIST2H2ACQ16777 129 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms