RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 MGAT5Q09328 741 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 MESP2Q0VG99 397 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 GALNT3Q14435 633 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 DPY19L3Q6ZPD9 716 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 Q6ZVU0 165 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 RALGPS2Q86X27 583 aaPredicted RBP15.23■□□□□ 0.03
COL4A5-203ENST00000470339 LRRC6Q86X45 466 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 CAMK1DQ8IU85 385 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 RYBPQ8N488 228 aaPredicted RBP15.23■□□□□ 0.03
COL4A5-203ENST00000470339 TTC8Q8TAM2 541 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 KCNV2Q8TDN2 545 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 PIH1D2Q8WWB5 315 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 VOPP1Q96AW1 172 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 ZNF669Q96BR6 464 aaPredicted RBP15.23■□□□□ 0.03
COL4A5-203ENST00000470339 ECHDC3Q96DC8 303 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 FCRL3Q96P31 734 aaPredicted RBP15.23■□□□□ 0.03
COL4A5-203ENST00000470339 HEPHQ9BQS7 1158 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 DHRS4Q9BTZ2 278 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 OSBPL1AQ9BXW6 950 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 TRABDQ9H4I3 376 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 SUV39H2Q9H5I1 410 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 MAGEE1Q9HCI5 957 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 TREX1Q9NSU2 369 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 THAP10Q9P2Z0 257 aaPredicted RBP15.23■□□□□ 0.03
COL4A5-203ENST00000470339 LGALS13Q9UHV8 139 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 PPIL1Q9Y3C6 166 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 PCDHB9Q9Y5E1 797 aa15.23■□□□□ 0.03
COL4A5-203ENST00000470339 EDDM13A0A1B0GTR0 161 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 HMGB1P1B2RPK0 211 aaPredicted RBP15.22■□□□□ 0.03
COL4A5-203ENST00000470339 LDB2O43679 373 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 SP100P23497 879 aaPredicted RBP15.22■□□□□ 0.03
COL4A5-203ENST00000470339 NMBRP28336 390 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 GALK1P51570 392 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 POLR2LP62875 67 aaKnown RBP15.22■□□□□ 0.03
COL4A5-203ENST00000470339 PFKPQ01813 784 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 TAF1AQ15573 450 aaPredicted RBP15.22■□□□□ 0.03
COL4A5-203ENST00000470339 QPCTQ16769 361 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 LONRF1Q17RB8 773 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 HNRNPA1L2Q32P51 320 aaKnown RBP15.22■□□□□ 0.03
COL4A5-203ENST00000470339 KBTBD12Q3ZCT8 623 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 FNDC3BQ53EP0 1204 aaKnown RBP15.22■□□□□ 0.03
COL4A5-203ENST00000470339 TSTD2Q5T7W7 516 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 PTCRAQ6ISU1 281 aaPredicted RBP15.22■□□□□ 0.03
COL4A5-203ENST00000470339 ADGRD1Q6QNK2 874 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 NDUFAF2Q8N183 169 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 LPCAT1Q8NF37 534 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 EPS8L3Q8TE67 593 aaKnown RBP15.22■□□□□ 0.03
COL4A5-203ENST00000470339 SLC44A1Q8WWI5 657 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 PPM1EQ8WY54 764 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 CDKL2Q92772 493 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 PTPRN2Q92932 1015 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 CERS2Q96G23 380 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 MSANTD3Q96H12 275 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 P2RY13Q9BPV8 354 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 TMEM245Q9H330 911 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 EURLQ9NYK6 297 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 SUN2Q9UH99 717 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 ZNF180Q9UJW8 692 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 PHTF1Q9UMS5 762 aa15.22■□□□□ 0.03
COL4A5-203ENST00000470339 TCF20Q9UGU0 1960 aaKnown RBP15.22■□□□□ 0.03
COL4A5-203ENST00000470339 TLDC2A0PJX2 215 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 POC1B-GALNT4F8VUJ3 575 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 SPECC1L-ADORA2AF8WAN1 911 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 RGS16O15492 202 aaPredicted RBP15.21■□□□□ 0.03
COL4A5-203ENST00000470339 GCAP28676 217 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 ATP5DP30049 168 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 CTHP32929 405 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 MSH2P43246 934 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 EPHB1P54762 984 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 ACVR1Q04771 509 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 ENPP2Q13822 863 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 ZNF234Q14588 700 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 SKIDA1Q1XH10 827 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 TNFAIP8L3Q5GJ75 292 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 PDPK2PQ6A1A2 396 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 KIAA0930Q6ICG6 404 aaPredicted RBP15.21■□□□□ 0.03
COL4A5-203ENST00000470339 TRMT10BQ6PF06 316 aaKnown RBP15.21■□□□□ 0.03
COL4A5-203ENST00000470339 BRAT1Q6PJG6 821 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 GDPD4Q6W3E5 623 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 OR6K2Q8NGY2 324 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 GABPB2Q8TAK5 448 aaPredicted RBP15.21■□□□□ 0.03
COL4A5-203ENST00000470339 STYXQ8WUJ0 223 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 PDCD6IPQ8WUM4 868 aaKnown RBP15.21■□□□□ 0.03
COL4A5-203ENST00000470339 MFSD3Q96ES6 412 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 ATP6V1G3Q96LB4 118 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 TRIM56Q9BRZ2 755 aaKnown RBP15.21■□□□□ 0.03
COL4A5-203ENST00000470339 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.21■□□□□ 0.03
COL4A5-203ENST00000470339 OGFRQ9NZT2 677 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 PSMC3IPQ9P2W1 217 aaPredicted RBP15.21■□□□□ 0.03
COL4A5-203ENST00000470339 DKK3Q9UBP4 350 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 IL36AQ9UHA7 158 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 IKBKGQ9Y6K9 419 aa15.21■□□□□ 0.03
COL4A5-203ENST00000470339 A0A0J9YYE9 177 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 TSPAN11A1L157 253 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 C2orf81A6NN90 581 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 SIN3BO75182 1162 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 PIGNO95427 931 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 TRBC1P01850 177 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 NFKBIAP25963 317 aa15.2■□□□□ 0.02
COL4A5-203ENST00000470339 SEPT6Q14141 434 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms