RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 HLA-BQ31612 363 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 KCNT1Q5JUK3 1230 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 KCTD16Q68DU8 428 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 HIBCHQ6NVY1 386 aaPredicted RBP17.85■□□□□ 0.45
MRPL28-208ENST00000469744 DSG4Q86SJ6 1040 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 PYROXD2Q8N2H3 581 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 OR2T34Q8NGX1 318 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 PIP4K2CQ8TBX8 421 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 TEKT4Q8WW24 435 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 SLC6A18Q96N87 628 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 STMN4Q9H169 189 aaPredicted RBP17.85■□□□□ 0.45
MRPL28-208ENST00000469744 SLC32A1Q9H598 525 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 PCDH9Q9HC56 1237 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 ATP13A1Q9HD20 1204 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 PPARGC1AQ9UBK2 798 aaKnown RBP17.85■□□□□ 0.45
MRPL28-208ENST00000469744 DNPEPQ9ULA0 475 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 NEU3Q9UQ49 428 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 ZNF148Q9UQR1 794 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 SNX11Q9Y5W9 270 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 CHD5Q8TDI0 1954 aa17.85■□□□□ 0.45
MRPL28-208ENST00000469744 ZNF487B1APH4 448 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 RNF103O00237 685 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 MCF2LO15068 1137 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 LRIG2O94898 1065 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 TOP3BO95985 862 aaKnown RBP17.84■□□□□ 0.45
MRPL28-208ENST00000469744 CTSLP07711 333 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 GNA12Q03113 381 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 CNTN1Q12860 1018 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 FOXC1Q12948 553 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 SLC29A2Q14542 456 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 ZSCAN26Q16670 478 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 BOLA3Q53S33 107 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 IZUMO3Q5VZ72 239 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 SCYL2Q6P3W7 929 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 C22orf39Q6P5X5 142 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 GSTA5Q7RTV2 222 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 CHST14Q8NCH0 376 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 OR2A12Q8NGT7 310 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 ZWILCHQ9H900 591 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 PPM1HQ9ULR3 514 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 ANKRD6Q9Y2G4 727 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 SPEGQ15772 3267 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 AKAP13Q12802 2813 aa17.84■□□□□ 0.45
MRPL28-208ENST00000469744 TBC1D3DA0A087WVF3 549 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 TBC1D3IA0A087WXS9 549 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 TBC1D3EA0A087X179 549 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 TBC1D3KA0A087X1G2 549 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 A0A1W2PPC4 97 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 TBC1D3FA6NER0 549 aaPredicted RBP17.83■□□□□ 0.45
MRPL28-208ENST00000469744 UPK3BL1B0FP48 263 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 TBC1D3LB9A6J9 549 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 UPK3BL2E5RIL1 263 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 DNALI1O14645 258 aaPredicted RBP17.83■□□□□ 0.45
MRPL28-208ENST00000469744 EIF3HO15372 352 aaKnown RBP eCLIP17.83■□□□□ 0.45
MRPL28-208ENST00000469744 ZMPSTE24O75844 475 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 TBC1D3HP0C7X1 549 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 SPINK2P20155 84 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 ARSEP51690 589 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 SIM1P81133 766 aaPredicted RBP17.83■□□□□ 0.45
MRPL28-208ENST00000469744 TFDP2Q14188 446 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 PDK2Q15119 407 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 TEAD4Q15561 434 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 TBC1D3GQ6DHY5 549 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 TBC1D3CQ6IPX1 549 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 PCGF5Q86SE9 256 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 NLRP14Q86W24 1093 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 TBC1D3Q8IZP1 549 aaPredicted RBP17.83■□□□□ 0.45
MRPL28-208ENST00000469744 KCTD6Q8NC69 237 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 GRIN3AQ8TCU5 1115 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 PHACTR1Q9C0D0 580 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 OSBPL2Q9H1P3 480 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 CWC15Q9P013 229 aaKnown RBP17.83■□□□□ 0.45
MRPL28-208ENST00000469744 ANGPTL2Q9UKU9 493 aa17.83■□□□□ 0.45
MRPL28-208ENST00000469744 C1QTNF3-AMACRE9PGA6 284 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 SMAPO00193 183 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 WNT9AO14904 365 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 ALOX15BO15296 676 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 TCEA3O75764 348 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 CER1O95813 267 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 AGTP01019 485 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 MAT2AP31153 395 aaKnown RBP17.82■□□□□ 0.44
MRPL28-208ENST00000469744 MDH1P40925 334 aaKnown RBP17.82■□□□□ 0.44
MRPL28-208ENST00000469744 GRIA4P48058 902 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 PPP2R2AP63151 447 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 GNGT1P63211 74 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 ARF5P84085 180 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 NRG1Q02297 640 aaPredicted RBP17.82■□□□□ 0.44
MRPL28-208ENST00000469744 AGBL4Q5VU57 503 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 FAM46CQ5VWP2 391 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 ZNF783Q6ZMS7 281 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 NAXDQ8IW45 347 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 MAP7D3Q8IWC1 876 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 NTAN1Q96AB6 310 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 TBC1D31Q96DN5 1066 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 CDC42EP4Q9H3Q1 356 aaKnown RBP17.82■□□□□ 0.44
MRPL28-208ENST00000469744 CNOT10Q9H9A5 744 aaKnown RBP17.82■□□□□ 0.44
MRPL28-208ENST00000469744 FCF1Q9Y324 198 aaKnown RBP17.82■□□□□ 0.44
MRPL28-208ENST00000469744 ERICH4A6NGS2 130 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 APOC4-APOC2K7ER74 178 aa17.82■□□□□ 0.44
MRPL28-208ENST00000469744 KPNA3O00505 521 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms