RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 RNASET2O00584 256 aaKnown RBP6.57□□□□□ -1.36
PTCD3-208ENST00000469585 ZNF197O14709 1029 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 TEX28O15482 410 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 NCR1O76036 304 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 GPANK1O95872 356 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 EDN1P05305 212 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 CNPP09543 421 aaKnown RBP6.57□□□□□ -1.36
PTCD3-208ENST00000469585 CCNE1P24864 410 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 ANXA13P27216 316 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 TKTP29401 623 aaKnown RBP6.57□□□□□ -1.36
PTCD3-208ENST00000469585 ADSSP30520 456 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 GTF2H1P32780 548 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 OR1D2P34982 312 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 TUFMP49411 452 aaKnown RBP6.57□□□□□ -1.36
PTCD3-208ENST00000469585 LILRA4P59901 499 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 ENPEPQ07075 957 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 PIGFQ07326 219 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 NFIL3Q16649 462 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 SGSM1Q2NKQ1 1148 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 ZNF699Q32M78 642 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 BEAN1Q3B7T3 259 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 NRN1LQ496H8 165 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 ARHGAP15Q53QZ3 475 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 ZNF667Q5HYK9 610 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 RARS2Q5T160 578 aaKnown RBP6.57□□□□□ -1.36
PTCD3-208ENST00000469585 CYP4A22Q5TCH4 519 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 ANKRD54Q6NXT1 300 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 SLC39A4Q6P5W5 647 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 C15orf39Q6ZRI6 1047 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 CBWD2Q8IUF1 395 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 TDRD5Q8NAT2 981 aaKnown RBP6.57□□□□□ -1.36
PTCD3-208ENST00000469585 LEMD2Q8NC56 503 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 ZNF483Q8TF39 744 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-208ENST00000469585 LRRC15Q8TF66 581 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 NELFBQ8WX92 580 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 SMG7Q92540 1137 aaKnown RBP6.57□□□□□ -1.36
PTCD3-208ENST00000469585 TAF4BQ92750 862 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 NMD3Q96D46 503 aaKnown RBP6.57□□□□□ -1.36
PTCD3-208ENST00000469585 MSLNLQ96KJ4 702 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 TNIP3Q96KP6 325 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 SENP8Q96LD8 212 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 FAM81BQ96LP2 452 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 STRA6Q9BX79 667 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 CLSTN2Q9H4D0 955 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 MMRN2Q9H8L6 949 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 CYP4F11Q9HBI6 524 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 AKIP1Q9NQ31 210 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 INTS13Q9NVM9 706 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 MARCH5Q9NX47 278 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 MTRRQ9UBK8 725 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 DKK2Q9UBU2 259 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 KCNE5Q9UJ90 142 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 BARX2Q9UMQ3 279 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-208ENST00000469585 SNX9Q9Y5X1 595 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 KIAA1671Q9BY89 1806 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 A0A087WWL8 130 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 CCDC195A0A1B0GUA6 201 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 TISP43B9A030 160 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 M0QYG6 137 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 KLRC4O43908 158 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 ZFPL1O95159 310 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 GRPP07492 148 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 ADRB2P07550 413 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 C1SP09871 688 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 DNAJB1P25685 340 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 HOXA9P31269 272 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 PRCPP42785 496 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 BRCC3P46736 316 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 SLC11A2P49281 568 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 MXI1P50539 228 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 CLCN4P51793 760 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 RPL10AP62906 217 aaKnown RBP6.56□□□□□ -1.36
PTCD3-208ENST00000469585 ZNF844Q08AG5 666 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 SLC13A2Q13183 592 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 CTBP1Q13363 440 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 BOP1Q14137 746 aaKnown RBP6.56□□□□□ -1.36
PTCD3-208ENST00000469585 CCDC183Q5T5S1 534 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 KRT39Q6A163 491 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 ISM2Q6H9L7 571 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 PRSS55Q6UWB4 352 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-208ENST00000469585 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-208ENST00000469585 TMEM184AQ6ZMB5 413 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 CLEC17AQ6ZS10 378 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 TMPRSS9Q7Z410 1059 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 ADGRD2Q7Z7M1 963 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 TMEM173Q86WV6 379 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-208ENST00000469585 SPATA2LQ8IUW3 424 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-208ENST00000469585 ADGRF2Q8IZF7 708 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 ZNF276Q8N554 614 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 SMRP1Q8NCR6 262 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 KIAA0895Q8NCT3 520 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 FAM46DQ8NEK8 389 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 ENGASEQ8NFI3 743 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 VN1R2Q8NFZ6 395 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 ZNF461Q8TAF7 563 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 POC1BQ8TC44 478 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 SPPL2BQ8TCT7 592 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 ZMAT2Q96NC0 199 aaKnown RBP6.56□□□□□ -1.36
PTCD3-208ENST00000469585 TRIB1Q96RU8 372 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 SMOQ99835 787 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms