RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 HDAC10Q969S8 669 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 SLC39A13Q96H72 371 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 MARK4Q96L34 752 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 ASB2Q96Q27 587 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 C2orf49Q9BVC5 232 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 MRM3Q9HC36 420 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 DDX28Q9NUL7 540 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 IL20Q9NYY1 176 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 ABCD2Q9UBJ2 740 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 AURKCQ9UQB9 309 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 ANKRD6Q9Y2G4 727 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 AFG3L2Q9Y4W6 797 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 PCDHGB1Q9Y5G3 927 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 A3GALT2U3KPV4 340 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 CCDC78A2IDD5 438 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 PDZK1P1A8MUH7 402 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 SLC16A4O15374 487 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 LYPLA2O95372 231 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 HPRP00739 348 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 APOA1P02647 267 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 CHRNA1P02708 482 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 CHRNGP07510 517 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 KRT19P08727 400 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 ELK4P28324 431 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 ADORA2AP29274 412 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 LRPAP1P30533 357 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 SPRP35270 261 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 HSPA2P54652 639 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 RPS8P62241 208 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 FASTKQ14296 549 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 C5orf22Q49AR2 442 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 YIF1BQ5BJH7 314 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 TJAP1Q5JTD0 557 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 SNAP47Q5SQN1 464 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 DESI1Q6ICB0 168 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 MPP5Q8N3R9 675 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 KIAA1958Q8N8K9 716 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 CYP2W1Q8TAV3 490 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 RIPOR3Q96MK2 946 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 RIT2Q99578 217 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 HOPXQ9BPY8 73 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 CALN1Q9BXU9 219 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 ZNF717Q9BY31 904 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 NMRAL1Q9HBL8 299 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 C12orf4Q9NQ89 552 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 ABCB10Q9NRK6 738 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 MTMR10Q9NXD2 777 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 MORF4L1Q9UBU8 362 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 SFMBT1Q9UHJ3 866 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 FBXO5Q9UKT4 447 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 MTF2Q9Y483 593 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 PCDHGA8Q9Y5G5 932 aa9.08□□□□□ -0.96
SMARCE1-207ENST00000469334 MAGEB16A2A368 324 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 OR5K3A6NET4 321 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 SDHDO14521 159 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 ARHGAP33O14559 1287 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 TOR1BO14657 336 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 TRIM16O95361 564 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 SNAP29O95721 258 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 TRUB2O95900 331 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 LDLRP01130 860 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 GFAPP14136 432 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 EPHX2P34913 555 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 PTGS2P35354 604 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 HADHAP40939 763 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 OR3A3P47888 321 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 SLC7A2P52569 658 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 LIMK2P53671 638 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 NRLP54845 237 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 ZNF45Q02386 682 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 NFIXQ14938 502 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 PLCL1Q15111 1095 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 TAF5Q15542 800 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 PSMD5Q16401 504 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 ARL13AQ5H913 290 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 PPM1JQ5JR12 505 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 KCNT1Q5JUK3 1230 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 TTC23Q5W5X9 447 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 STEAP3Q658P3 488 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 PNCKQ6P2M8 343 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 FAM122CQ6P4D5 195 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 OTOP3Q7RTS5 596 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 R3HCC1LQ7Z5L2 792 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 ARFGAP1Q8N6T3 406 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 CCDC185Q8N715 623 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 IL17RDQ8NFM7 739 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 GABPB2Q8TAK5 448 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 AGR3Q8TD06 166 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 C8orf48Q96LL4 319 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 TWNKQ96RR1 684 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 RBBP8Q99708 897 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 KCTD14Q9BQ13 255 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 BTBD2Q9BX70 525 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 ASPSCR1Q9BZE9 553 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 ZC3H12CQ9C0D7 883 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 MMP27Q9H306 513 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 EPS8L2Q9H6S3 715 aa9.07□□□□□ -0.96
SMARCE1-207ENST00000469334 PDE10AQ9Y233 779 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms