RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 TRIM55Q9BYV6 548 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 FAM96AQ9H5X1 160 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 ACTR5Q9H9F9 607 aaPredicted RBP9.4□□□□□ -0.9
SMC1A-205ENST00000469129 HCFC1R1Q9NWW0 138 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 SIRPGQ9P1W8 387 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 DNMT3BQ9UBC3 853 aaKnown RBP9.4□□□□□ -0.9
SMC1A-205ENST00000469129 SLC2A6Q9UGQ3 507 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 GGT7Q9UJ14 662 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 SLC25A13Q9UJS0 675 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 FBXO5Q9UKT4 447 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 SLC39A10Q9ULF5 831 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 RPL26L1Q9UNX3 145 aaKnown RBP9.4□□□□□ -0.9
SMC1A-205ENST00000469129 VPS9D1Q9Y2B5 631 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 MTO1Q9Y2Z2 717 aaKnown RBP9.4□□□□□ -0.9
SMC1A-205ENST00000469129 RRP15Q9Y3B9 282 aaKnown RBP9.4□□□□□ -0.9
SMC1A-205ENST00000469129 OR51B4Q9Y5P0 310 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 RAI2Q9Y5P3 530 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 USH1CQ9Y6N9 552 aa9.4□□□□□ -0.9
SMC1A-205ENST00000469129 DENND4AQ7Z401 1863 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 WDR91A4D1P6 747 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 LDB2O43679 373 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 SNAP91O60641 907 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 SOCS5O75159 536 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 RFPL2O75678 378 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 DCTN3O75935 186 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 TGDSO95455 350 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 GLP2RO95838 553 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 PENKP01210 267 aaPredicted RBP9.39□□□□□ -0.91
SMC1A-205ENST00000469129 PROCP04070 461 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 CA3P07451 260 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 GJA1P17302 382 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 BGNP21810 368 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 GRK2P25098 689 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 WEE1P30291 646 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 IRS1P35568 1242 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 CCR2P41597 374 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 RGRP47804 291 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 ZNF140P52738 457 aaPredicted RBP9.39□□□□□ -0.91
SMC1A-205ENST00000469129 PRKAA2P54646 552 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 RAB10P61026 200 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 ZXDBP98169 803 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 CCDC15Q0P6D6 951 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 ASPHQ12797 758 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 LMAN2Q12907 356 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 IFT88Q13099 833 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 MSLNQ13421 630 aaPredicted RBP9.39□□□□□ -0.91
SMC1A-205ENST00000469129 USP10Q14694 798 aaKnown RBP9.39□□□□□ -0.91
SMC1A-205ENST00000469129 SETDB1Q15047 1291 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 ZNF77Q15935 545 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 FSCBQ5H9T9 825 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 AARS2Q5JTZ9 985 aaKnown RBP9.39□□□□□ -0.91
SMC1A-205ENST00000469129 PRSS36Q5K4E3 855 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 RNF187Q5TA31 235 aaPredicted RBP9.39□□□□□ -0.91
SMC1A-205ENST00000469129 FAM45BPQ6NSW5 357 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 CDHR3Q6ZTQ4 885 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 OTOAQ7RTW8 1153 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 CMC1Q7Z7K0 106 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 SDCCAG8Q86SQ7 713 aaPredicted RBP9.39□□□□□ -0.91
SMC1A-205ENST00000469129 CILP2Q8IUL8 1156 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 OR13J1Q8NGT2 312 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 GPR150Q8NGU9 434 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 OR6P1Q8NGX9 317 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 FAM45AQ8TCE6 357 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 WFDC5Q8TCV5 224 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 PPP2R3CQ969Q6 453 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 ALG14Q96F25 216 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 ELMO2Q96JJ3 720 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 EXOC2Q96KP1 924 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 C19orf43Q9BQ61 176 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 SLC2A11Q9BYW1 496 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 KDM4CQ9H3R0 1056 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 SFXN1Q9H9B4 322 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 PIDD1Q9HB75 910 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 CATSPERZQ9NTU4 200 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 ABCB8Q9NUT2 735 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 DZANK1Q9NVP4 752 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 INTS10Q9NVR2 710 aaKnown RBP9.39□□□□□ -0.91
SMC1A-205ENST00000469129 NLE1Q9NVX2 485 aaPredicted RBP9.39□□□□□ -0.91
SMC1A-205ENST00000469129 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.39□□□□□ -0.91
SMC1A-205ENST00000469129 SZT2Q5T011 3432 aa9.39□□□□□ -0.91
SMC1A-205ENST00000469129 MUC22E2RYF6 1773 aaPredicted RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 A0A1W2PQ67 120 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 TTC24A2A3L6 582 aaPredicted RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 CCT8L1PA6NM43 557 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 GOLGA8TH3BQL2 631 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 SCAMP3O14828 347 aaKnown RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 MOSPD3O75425 235 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 SLC34A2O95436 690 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 GSRP00390 522 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 AHSGP02765 367 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 ATP5BP06576 529 aaKnown RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 C2P06681 752 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 LPOP22079 712 aaPredicted RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 PSMA3P25788 255 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 SERPINA4P29622 427 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 CSRP3P50461 194 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 EPHB1P54762 984 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 SNRPD1P62314 119 aaKnown RBP9.38□□□□□ -0.91
SMC1A-205ENST00000469129 MPP1Q00013 466 aa9.38□□□□□ -0.91
SMC1A-205ENST00000469129 BCL2L1Q07817 233 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms