RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 AGBL4Q5VU57 503 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 DCAF12L1Q5VU92 463 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 PAPD7Q5XG87 772 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 PMS2CLQ68D20 193 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 LAIR1Q6GTX8 287 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 KIAA1161Q6NSJ0 714 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 LINGO4Q6UY18 593 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 C4orf22Q6V702 233 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ERN2Q76MJ5 926 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 LPCAT2Q7L5N7 544 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 IQCHQ86VS3 1027 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 TRIM69Q86WT6 500 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF354CQ86Y25 554 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 CPNE8Q86YQ8 564 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 RFX6Q8HWS3 928 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 MMAAQ8IVH4 418 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 CCDC50Q8IVM0 306 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 CDKL3Q8IVW4 592 aaPredicted RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 REXO1L1PQ8IX06 675 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 KLHDC8BQ8IXV7 354 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 STK40Q8N2I9 435 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 RASGEF1CQ8N431 466 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 SUMF1Q8NBK3 374 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 TSEN2Q8NCE0 465 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 PRSS33Q8NF86 280 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 OR2T34Q8NGX1 318 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 SLC35B2Q8TB61 432 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 PIP4K2CQ8TBX8 421 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ACTL9Q8TC94 416 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ACTRT1Q8TDG2 376 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 TFB1MQ8WVM0 346 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 HMGB4Q8WW32 186 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 HTR3CQ8WXA8 447 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ASB12Q8WXK4 309 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 DNASE2BQ8WZ79 361 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 TADA1Q96BN2 335 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF419Q96HQ0 510 aaPredicted RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 CELF6Q96J87 481 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 TEKT5Q96M29 485 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 QKIQ96PU8 341 aaKnown RBP eCLIP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 HHIPQ96QV1 700 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 MCCC1Q96RQ3 725 aaPredicted RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 LYSMD1Q96S90 227 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 SRPK1Q96SB4 655 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 OMDQ99983 421 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 BTBD1Q9H0C5 482 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 CDH19Q9H159 772 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ATP13A3Q9H7F0 1226 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 DYRK4Q9NR20 520 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 KLHL11Q9NVR0 708 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 FBXL12Q9NXK8 326 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 KCTD5Q9NXV2 234 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 WSB2Q9NYS7 404 aaPredicted RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 BCCIPQ9P287 314 aaKnown RBP eCLIP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 HECAQ9UBI9 543 aaPredicted RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 LHX3Q9UBR4 397 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 SUSD2Q9UGT4 822 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 FEZ2Q9UHY8 353 aaPredicted RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ATXN7L1Q9ULK2 861 aaPredicted RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 SNX12Q9UMY4 172 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 DMTF1Q9Y222 760 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 NCKAP1Q9Y2A7 1128 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ATP8A1Q9Y2Q0 1164 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 PPIL1Q9Y3C6 166 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 HYOU1Q9Y4L1 999 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 PCDHB9Q9Y5E1 797 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 WDFY3Q8IZQ1 3526 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 PCNX2A6NKB5 2137 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 TRPM6Q9BX84 2022 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 ZFC3H1O60293 1989 aaKnown RBP3.56□□□□□ -1.84
TRIM59-202ENST00000468542 LRP4O75096 1905 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 CEP295Q9C0D2 2601 aa3.56□□□□□ -1.84
TRIM59-202ENST00000468542 SPEGQ15772 3267 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 GOLGA6L10A0A0M3HER8 536 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 GOLGA6CA6NDK9 693 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 GOLGA6BA6NDN3 693 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 ANTXRLA6NF34 631 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 C5orf60A6NFR6 353 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 C16orf96A6NNT2 1141 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 METTL12A8MUP2 240 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 UPK3BL1B0FP48 263 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 PRR5-ARHGAP8B1AHC4 643 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 UPK3BL2E5RIL1 263 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 KIF2AO00139 706 aaPredicted RBP3.55□□□□□ -1.84
TRIM59-202ENST00000468542 PSMD11O00231 422 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 RNF103O00237 685 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 PGRMC1O00264 195 aaKnown RBP3.55□□□□□ -1.84
TRIM59-202ENST00000468542 KPNA3O00505 521 aaPredicted RBP3.55□□□□□ -1.84
TRIM59-202ENST00000468542 KRIT1O00522 736 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 KCNK3O14649 394 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 MUSKO15146 869 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 MID1O15344 667 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 INSIG1O15503 277 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 LIASO43766 372 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 FZD6O60353 706 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 NDUFS2O75306 463 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 GCATO75600 419 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 LEFTY1O75610 366 aa3.55□□□□□ -1.84
TRIM59-202ENST00000468542 RNASEH2AO75792 299 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms