RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 MRPS26Q9BYN8 205 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 SENP6Q9GZR1 1112 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 PCDHAC1Q9H158 963 aa15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 MRM3Q9HC36 420 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 ABT1Q9ULW3 272 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-211ENST00000468468 MYOCOSA0A1B0GUC4 107 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 CASTOR2A6NHX0 329 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 E7ENX8 843 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 VILLO15195 856 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 CA12O43570 354 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 CAPNS1P04632 268 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 FAM58BPP0C7Q3 252 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 KCNA5P22460 613 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 CYP2C18P33260 490 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 SH3BGRP55822 239 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 PRKCZQ05513 592 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 MAP7Q14244 749 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 FAM83EQ2M2I3 478 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 NADK2Q4G0N4 442 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 ZNF789Q5FWF6 425 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 TECRLQ5HYJ1 363 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 BTBD8Q5XKL5 378 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 KIAA0930Q6ICG6 404 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 CHSY3Q70JA7 882 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 METTL25Q8N6Q8 603 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 MPP4Q96JB8 637 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 MRGPRX2Q96LB1 330 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 YIPF2Q9BWQ6 316 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 GRIP2Q9C0E4 1043 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 ZNF696Q9H7X3 374 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 TNFRSF12AQ9NP84 129 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 NDFIP2Q9NV92 336 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 AK5Q9Y6K8 562 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 SCN10AQ9Y5Y9 1956 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 CCDC160A6NGH7 325 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 KPNA6O60684 536 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 SCNN1GP51170 649 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 FCGRTP55899 365 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 TRIM25Q14258 630 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 FASTKQ14296 549 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 PCSK7Q16549 785 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 AGKQ53H12 422 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 SERINC5Q86VE9 423 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 HMGCLL1Q8TB92 370 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 DTNBP1Q96EV8 351 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 ZFRQ96KR1 1074 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 OLFM1Q99784 485 aa15.89■□□□□ 0.13
TSPAN4-211ENST00000468468 A8MT66 165 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 UBDO15205 165 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 PAGE1O75459 146 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 ASGR1P07306 291 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 HDCP19113 662 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 PLK1P53350 603 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 C1QTNF8P60827 252 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 USP46P62068 366 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 PFKPQ01813 784 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 CACNB2Q08289 660 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 PPP1R3AQ16821 1122 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 TIGD5Q53EQ6 642 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 NOMO2Q5JPE7 1267 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 RANBP10Q6VN20 620 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 AGMOQ6ZNB7 445 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 PTAR1Q7Z6K3 402 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 AFAP1L2Q8N4X5 818 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 EME1Q96AY2 570 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 FAR2Q96K12 515 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 RTP3Q9BQQ7 232 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 SEMA6AQ9H2E6 1030 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 CATSPERBQ9H7T0 1116 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 EML4Q9HC35 981 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 PLK2Q9NYY3 685 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 CCDC167Q9P0B6 97 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 ATXN10Q9UBB4 475 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 SUCOQ9UBS9 1254 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 AP4S1Q9Y587 144 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 TLL2Q9Y6L7 1015 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 ARL5CA6NH57 179 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 PSMD12O00232 456 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 GPC4O75487 556 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 IPO13O94829 963 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 THPOP40225 353 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 LRP8Q14114 963 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 SQLEQ14534 574 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 MAPRE2Q15555 327 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 MGAT5BQ3V5L5 792 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 AGAP9Q5VTM2 703 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 REP15Q6BDI9 236 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 PAOXQ6QHF9 649 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 CUZD1Q86UP6 607 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 LZTR1Q8N653 840 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 SCAMP5Q8TAC9 235 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 PHF21BQ96EK2 531 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 UNC93B1Q9H1C4 597 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 MEAF6Q9HAF1 191 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 SPC25Q9HBM1 224 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 MRPL40Q9NQ50 206 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 CACNA2D2Q9NY47 1150 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 SFMBT1Q9UHJ3 866 aa15.88■□□□□ 0.13
TSPAN4-211ENST00000468468 FBP2O00757 339 aa15.87■□□□□ 0.13
TSPAN4-211ENST00000468468 IRAK2O43187 625 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms