RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 EIF1AXP47813 144 aaKnown RBP11.27□□□□□ -0.61
COL4A6-205ENST00000468338 SUOXP51687 545 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 HADHBP55084 474 aaKnown RBP11.27□□□□□ -0.61
COL4A6-205ENST00000468338 RPS21P63220 83 aaKnown RBP11.27□□□□□ -0.61
COL4A6-205ENST00000468338 SLC10A7Q0GE19 358 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 MMRN1Q13201 1228 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 STAT4Q14765 748 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 PAFAH1B3Q15102 231 aaKnown RBP11.27□□□□□ -0.61
COL4A6-205ENST00000468338 TLR1Q15399 786 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 SHBQ15464 509 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 COX20Q5RI15 118 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 SEL1L3Q68CR1 1132 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 LIAT1Q6ZQX7 453 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 ADAT2Q7Z6V5 191 aaKnown RBP11.27□□□□□ -0.61
COL4A6-205ENST00000468338 ABI3BPQ7Z7G0 1075 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 GLRX5Q86SX6 157 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 VSIG1Q86XK7 387 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 SPATS2Q86XZ4 545 aaKnown RBP11.27□□□□□ -0.61
COL4A6-205ENST00000468338 CCDC170Q8IYT3 715 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 RYBPQ8N488 228 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-205ENST00000468338 PCDH19Q8TAB3 1148 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 BAHD1Q8TBE0 780 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-205ENST00000468338 ECHDC3Q96DC8 303 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 EXOC2Q96KP1 924 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 NSMCE3Q96MG7 304 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 LENG8Q96PV6 779 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-205ENST00000468338 PANX2Q96RD6 677 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 TUBGCP5Q96RT8 1024 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 ELF4Q99607 663 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-205ENST00000468338 SLC17A9Q9BYT1 436 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 SUV39H2Q9H5I1 410 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 SP110Q9HB58 689 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 AASDHPPTQ9NRN7 309 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 GPR27Q9NS67 375 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 WASF3Q9UPY6 502 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 HS3ST3A1Q9Y663 406 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 LRRK1Q38SD2 2015 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 ACACBO00763 2458 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 ZNF487B1APH4 448 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 DFFAO00273 331 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 KCNK3O14649 394 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 SLC31A1O15431 190 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 FLRT2O43155 660 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 MAGEC1O60732 1142 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 PCDH8O95206 1070 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 PRLRP16471 622 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 CCT8P50990 548 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 C21orf59P57076 290 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 FAM193AP78312 1265 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 SHC2P98077 582 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 GALNT2Q10471 571 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 KRT81Q14533 505 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 MESDQ14696 234 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 UGP2Q16851 508 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 SLC45A4Q5BKX6 768 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 ANKRD20A8PQ5CZ79 823 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 LRRC38Q5VT99 294 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 NCBP2-AS2Q69YL0 99 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 SRLQ86TD4 932 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 TTC7BQ86TV6 843 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 CAMK1DQ8IU85 385 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 NAXDQ8IW45 347 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 TEX26Q8N6G2 289 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 PQLC3Q8N755 202 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 RAPGEF5Q92565 580 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 FATE1Q969F0 183 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 BMFQ96LC9 184 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 DMRTB1Q96MA1 342 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 KLF6Q99612 283 aaPredicted RBP11.26□□□□□ -0.61
COL4A6-205ENST00000468338 GDF3Q9NR23 364 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 GGT7Q9UJ14 662 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 PCOLCE2Q9UKZ9 415 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 CA5BQ9Y2D0 317 aa11.26□□□□□ -0.61
COL4A6-205ENST00000468338 GOLGA4Q13439 2230 aaKnown RBP11.25□□□□□ -0.61
COL4A6-205ENST00000468338 TDRD6O60522 2096 aaKnown RBP11.25□□□□□ -0.61
COL4A6-205ENST00000468338 C3orf70A6NLC5 250 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-205ENST00000468338 TRAFD1O14545 582 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-205ENST00000468338 RAD51BO15315 384 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 PIGNO95427 931 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 PAK4O96013 591 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-205ENST00000468338 KDELR1P24390 212 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 AKT2P31751 481 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 HSPA9P38646 679 aaKnown RBP11.25□□□□□ -0.61
COL4A6-205ENST00000468338 SLC1A1P43005 524 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 SSR1P43307 286 aaKnown RBP11.25□□□□□ -0.61
COL4A6-205ENST00000468338 MAGEA1P43355 309 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 RENBPP51606 427 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 AP1S1P61966 158 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 LBRQ14739 615 aaKnown RBP11.25□□□□□ -0.61
COL4A6-205ENST00000468338 SUZ12Q15022 739 aaKnown RBP11.25□□□□□ -0.61
COL4A6-205ENST00000468338 TMEM52BQ4KMG9 183 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 BRAT1Q6PJG6 821 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 GCNT7Q6ZNI0 430 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 KANSL1Q7Z3B3 1105 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 ZSWIM9Q86XI8 627 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 MAP7D3Q8IWC1 876 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 PGBD5Q8N414 524 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 OXR1Q8N573 874 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 KCTD6Q8NC69 237 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 DENND6BQ8NEG7 585 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms