RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 SPATA31D4Q6ZUB0 917 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 SRLQ86TD4 932 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 CRLF3Q8IUI8 442 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 CILP2Q8IUL8 1156 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 HOMEZQ8IX15 550 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 UNC5BQ8IZJ1 945 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 ARMC2Q8NEN0 867 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 OR13J1Q8NGT2 312 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 PPP1R14CQ8TAE6 165 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 TTC8Q8TAM2 541 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 FAM45AQ8TCE6 357 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 PPP4R1Q8TF05 950 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 STON2Q8WXE9 905 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.25□□□□□ -0.77
MSH5-213ENST00000468136 RMDN1Q96DB5 314 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 SLC22A12Q96S37 553 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 AGAP2Q99490 1192 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 TTC1Q99614 292 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 MAGEE1Q9HCI5 957 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 NLE1Q9NVX2 485 aaPredicted RBP10.25□□□□□ -0.77
MSH5-213ENST00000468136 VPS51Q9UID3 782 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 SLC8A2Q9UPR5 921 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 HS3ST2Q9Y278 367 aa10.25□□□□□ -0.77
MSH5-213ENST00000468136 DNAH12Q6ZR08 3092 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 FAM95CA0A1B0GW59 222 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 LCHNA4D1U4 455 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 TMEM114B3SHH9 223 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 MUSKO15146 869 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 FZD6O60353 706 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 GSRP00390 522 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 RBP1P09455 135 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 SLC1A2P43004 574 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 CHRNA4P43681 627 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 SGSHP51688 502 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 CORO7P57737 925 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 STX3Q13277 289 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 RAB30Q15771 203 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 FAM83EQ2M2I3 478 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 PLEKHG6Q3KR16 790 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 PRSS36Q5K4E3 855 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 AGAP9Q5VTM2 703 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 ZDHHC20Q5W0Z9 365 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 FOXR1Q6PIV2 292 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 CERS6Q6ZMG9 384 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 RAPH1Q70E73 1250 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 OTOAQ7RTW8 1153 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 GLT6D1Q7Z4J2 308 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 TBC1D1Q86TI0 1168 aaPredicted RBP10.24□□□□□ -0.77
MSH5-213ENST00000468136 WDR75Q8IWA0 830 aaKnown RBP10.24□□□□□ -0.77
MSH5-213ENST00000468136 BBS7Q8IWZ6 715 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 STK40Q8N2I9 435 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 CELF5Q8N6W0 485 aaKnown RBP10.24□□□□□ -0.77
MSH5-213ENST00000468136 PCDH20Q8N6Y1 951 aaKnown RBP10.24□□□□□ -0.77
MSH5-213ENST00000468136 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.24□□□□□ -0.77
MSH5-213ENST00000468136 OR52K2Q8NGK3 314 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 OR6P1Q8NGX9 317 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 BLOC1S5Q8TDH9 187 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 WFIKKN2Q8TEU8 576 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 CCT6BQ92526 530 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 ZNF778Q96MU6 729 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 C17orf80Q9BSJ5 609 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 RABEP2Q9H5N1 569 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 ATP13A3Q9H7F0 1226 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 NMRAL1Q9HBL8 299 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 OBP2AQ9NY56 170 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 KCNK4Q9NYG8 393 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 COPG2Q9UBF2 871 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 LHX3Q9UBR4 397 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 SLC25A13Q9UJS0 675 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 SLC39A10Q9ULF5 831 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 SORCS3Q9UPU3 1222 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 RRP15Q9Y3B9 282 aaKnown RBP10.24□□□□□ -0.77
MSH5-213ENST00000468136 DENND4CQ5VZ89 1909 aa10.24□□□□□ -0.77
MSH5-213ENST00000468136 PCNTO95613 3336 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 HTRA2O43464 458 aaPredicted RBP10.23□□□□□ -0.77
MSH5-213ENST00000468136 SNNO75324 88 aaPredicted RBP10.23□□□□□ -0.77
MSH5-213ENST00000468136 KLHL2O95198 593 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 CD160O95971 181 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 ASLP04424 464 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 CPA3P15088 417 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 MZF1P28698 734 aaPredicted RBP10.23□□□□□ -0.77
MSH5-213ENST00000468136 SERPINA4P29622 427 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 NNMTP40261 264 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 TTPAP49638 278 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 RASSF2P50749 326 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 ZNF140P52738 457 aaPredicted RBP10.23□□□□□ -0.77
MSH5-213ENST00000468136 EPHB1P54762 984 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 ADARP55265 1226 aaKnown RBP10.23□□□□□ -0.77
MSH5-213ENST00000468136 ZXDBP98169 803 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 BCL2L1Q07817 233 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 LMAN2Q12907 356 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 E2F5Q15329 346 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 TEAD2Q15562 447 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 CHI3L2Q15782 390 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 ZNF77Q15935 545 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 TYSND1Q2T9J0 566 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 FASTKD1Q53R41 847 aaKnown RBP10.23□□□□□ -0.77
MSH5-213ENST00000468136 LYPLAL1Q5VWZ2 237 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 CDHR3Q6ZTQ4 885 aa10.23□□□□□ -0.77
MSH5-213ENST00000468136 FAM47EQ6ZV65 393 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms