RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 LPCAT1Q8NF37 534 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 PIH1D2Q8WWB5 315 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 SPACA7Q96KW9 195 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 FICDQ9BVA6 458 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 RAB17Q9H0T7 212 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 SERGEFQ9UGK8 458 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 ANKRD66B4E2M5 251 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 GALR2O43603 387 aaPredicted RBP15.3■□□□□ 0.04
SNIP1-202ENST00000468040 AP1G1O43747 822 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 SUN1O94901 812 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 FGF1P05230 155 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 TIMP2P16035 220 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 TPSB2P20231 275 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 ADRA1AP35348 466 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 MAGEA6P43360 314 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 ELP6Q0PNE2 266 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 GALNT3Q14435 633 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 ANGPT1Q15389 498 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 TPSAB1Q15661 275 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 SLC1A5Q15758 541 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 GLE1Q53GS7 698 aaKnown RBP15.3■□□□□ 0.04
SNIP1-202ENST00000468040 RANBP10Q6VN20 620 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 KDELC2Q7Z4H8 507 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 RMDN1Q96DB5 314 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 SRPK1Q96SB4 655 aaKnown RBP15.3■□□□□ 0.04
SNIP1-202ENST00000468040 TBL1YQ9BQ87 522 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 TRIM51Q9BSJ1 452 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 LRFN3Q9BTN0 628 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 BTBD1Q9H0C5 482 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 NEUROG2Q9H2A3 272 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 KDM4CQ9H3R0 1056 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 SGK2Q9HBY8 427 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 ZDBF2Q9HCK1 2354 aa15.3■□□□□ 0.04
SNIP1-202ENST00000468040 UTP11Q9Y3A2 253 aaKnown RBP15.3■□□□□ 0.04
SNIP1-202ENST00000468040 A0A0J9YYE9 177 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 EFCAB8A8MWE9 144 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 AP3B1O00203 1094 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 PLK4O00444 970 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 NEMP1O14524 444 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 AREL1O15033 823 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 PLRG1O43660 514 aaKnown RBP15.29■□□□□ 0.04
SNIP1-202ENST00000468040 AGTP01019 485 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 TRBC1P01850 177 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 ATXN1LP0C7T5 689 aaKnown RBP15.29■□□□□ 0.04
SNIP1-202ENST00000468040 CD6P30203 668 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 ABL2P42684 1182 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 FNTBP49356 437 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 ADPRHP54922 357 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 SARNPP82979 210 aaKnown RBP15.29■□□□□ 0.04
SNIP1-202ENST00000468040 DMWDQ09019 674 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 QPCTQ16769 361 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 KCTD19Q17RG1 926 aaPredicted RBP15.29■□□□□ 0.04
SNIP1-202ENST00000468040 MAP7D1Q3KQU3 841 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 SIRPB2Q5JXA9 342 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 FAM124AQ86V42 546 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 PPIL6Q8IXY8 311 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 NOA1Q8NC60 698 aaKnown RBP15.29■□□□□ 0.04
SNIP1-202ENST00000468040 BBOF1Q8ND07 529 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 OR14C36Q8NHC7 312 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 CPT1BQ92523 772 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 SCRN2Q96FV2 425 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 MCCC1Q96RQ3 725 aaPredicted RBP15.29■□□□□ 0.04
SNIP1-202ENST00000468040 PRRX2Q99811 253 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 ERP44Q9BS26 406 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 ARNT2Q9HBZ2 717 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 PREBQ9HCU5 417 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 PCDH12Q9NPG4 1184 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 TPX2Q9ULW0 747 aaKnown RBP15.29■□□□□ 0.04
SNIP1-202ENST00000468040 CYP8B1Q9UNU6 501 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 PPIL1Q9Y3C6 166 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 FADS3Q9Y5Q0 445 aa15.29■□□□□ 0.04
SNIP1-202ENST00000468040 IGHV1OR15-9A0A0B4J2B8 117 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 CAPN8A6NHC0 703 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 LRRC72A6NJI9 287 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 SMAPO00193 183 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 DNALI1O14645 258 aaPredicted RBP15.28■□□□□ 0.04
SNIP1-202ENST00000468040 RIOK3O14730 519 aaKnown RBP15.28■□□□□ 0.04
SNIP1-202ENST00000468040 TSPAN6O43657 245 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 CYP2A6P11509 494 aaPredicted RBP15.28■□□□□ 0.04
SNIP1-202ENST00000468040 CHRNA4P43681 627 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 TAS2R38P59533 333 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 FAM193AP78312 1265 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 SPARCL1Q14515 664 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 KCNJ11Q14654 390 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 LRRC73Q5JTD7 316 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 SYCP2LQ5T4T6 812 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 IZUMO3Q5VZ72 239 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 NEK5Q6P3R8 708 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 SLC36A4Q6YBV0 504 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 PPP1R21Q6ZMI0 780 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 C11orf74Q86VG3 221 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 HOOK3Q86VS8 718 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 SLC25A41Q8N5S1 370 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 RLN3Q8WXF3 142 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 NELL1Q92832 810 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 TOE1Q96GM8 510 aaKnown RBP15.28■□□□□ 0.04
SNIP1-202ENST00000468040 SNF8Q96H20 258 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 LYSMD1Q96S90 227 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 APOL2Q9BQE5 337 aa15.28■□□□□ 0.04
SNIP1-202ENST00000468040 LRRC1Q9BTT6 524 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms